Wwh Metamonitor
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Wwh Metamonitor
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Author : Ran Dach
language : en
Publisher:
Release Date : 2017
Wwh Metamonitor written by Ran Dach and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017 with categories.
"The number and amplitude of emerging infectious diseases is increasing. Characterizing novel or re-emerging infections is aided by the availability of pathogen genomes and metagenomes. Private and distributed next generation genomic sequencing data is generated worldwide in medical clinics, hospitals and sequencing centers. WWH-MetaMonitor is an application that exploits pathogen genomic sequences and the contribution of genomic comparative analysis to monitor and understand the epidemiology of recently emerged infectious diseases. It is implemented on the recently developed WWH framework, a platform for running distributed applications in a multi-cluster environment based on YARN. The distributed and "on data" computation that WWH provides fits the scenario of globally spread independent sequencing centers that produce massive amounts of sequence data that need to be analyzed as a whole without being transferred, and the nature of modern times outbreaks, which spread rapidly on a global scale. The work on WWH-MetaMonitor was presented at "Strata + Hadoop World in New York 2016" conference, and also yielded 11 U.S. patent applications: Methods and apparatus implementing data model for disease monitoring, characterization and investigation (15/281,248) ; Distributed data processing platform for biological surveillance using genomic and epidemiological comparisons (14/984,004) ; Automated metagenomic monitoring and characterization (14/983,971) ; Metagenomics-based characterization using genomic and epidemiological comparisons (14/983,981) ; Distributed data processing platform for metagenomic monitoring and characterization (14/983,991) ; Distributed data processing platform for metagenomic epidemiological investigation (14/983,943) ; Distributed data processing platform for biological surveillance using big data profiles (14/983,952) ; Metagenomics-based biological surveillance system with distributed sequencing centers (14/983,958) ; Metagenomics-based biological surveillance system using big data profiles (14/983,914) ; Automated metagenomic epidemiological investigation (14/983,920) ; Reasoning on data model for disease monitoring, characterization and investigation (14/983,932)." -- from abstract.