Analysis Of Parallel Spike Trains
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Analysis Of Parallel Spike Trains
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Author : Sonja Grün
language : en
Publisher: Springer Science & Business Media
Release Date : 2010-08-18
Analysis Of Parallel Spike Trains written by Sonja Grün and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-08-18 with Science categories.
Solid and transparent data analysis is the most important basis for reliable interpretation of experiments. The technique of parallel spike train recordings using multi-electrode arrangements has been available for many decades now, but only recently gained wide popularity among electro physiologists. Many traditional analysis methods are based on firing rates obtained by trial-averaging, and some of the assumptions for such procedures to work can be ignored without serious consequences. The situation is different for correlation analysis, the result of which may be considerably distorted if certain critical assumptions are violated. The focus of this book is on concepts and methods of correlation analysis (synchrony, patterns, rate covariance), combined with a solid introduction into approaches for single spike trains, which represent the basis of correlations analysis. The book also emphasizes pitfalls and potential wrong interpretations of data due to violations of critical assumptions.
Analysis Of Parallel Spike Trains
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Author : Sonja Grün
language : en
Publisher: Springer
Release Date : 2010-08-30
Analysis Of Parallel Spike Trains written by Sonja Grün and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-08-30 with Medical categories.
Solid and transparent data analysis is the most important basis for reliable interpretation of experiments. The technique of parallel spike train recordings using multi-electrode arrangements has been available for many decades now, but only recently gained wide popularity among electro physiologists. Many traditional analysis methods are based on firing rates obtained by trial-averaging, and some of the assumptions for such procedures to work can be ignored without serious consequences. The situation is different for correlation analysis, the result of which may be considerably distorted if certain critical assumptions are violated. The focus of this book is on concepts and methods of correlation analysis (synchrony, patterns, rate covariance), combined with a solid introduction into approaches for single spike trains, which represent the basis of correlations analysis. The book also emphasizes pitfalls and potential wrong interpretations of data due to violations of critical assumptions.
Springer Handbook Of Bio Neuro Informatics
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Author : Nikola Kasabov
language : en
Publisher: Springer Science & Business Media
Release Date : 2013-11-30
Springer Handbook Of Bio Neuro Informatics written by Nikola Kasabov and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-11-30 with Technology & Engineering categories.
The Springer Handbook of Bio-/Neuro-Informatics is the first published book in one volume that explains together the basics and the state-of-the-art of two major science disciplines in their interaction and mutual relationship, namely: information sciences, bioinformatics and neuroinformatics. Bioinformatics is the area of science which is concerned with the information processes in biology and the development and applications of methods, tools and systems for storing and processing of biological information thus facilitating new knowledge discovery. Neuroinformatics is the area of science which is concerned with the information processes in biology and the development and applications of methods, tools and systems for storing and processing of biological information thus facilitating new knowledge discovery. The text contains 62 chapters organized in 12 parts, 6 of them covering topics from information science and bioinformatics, and 6 cover topics from information science and neuroinformatics. Each chapter consists of three main sections: introduction to the subject area, presentation of methods and advanced and future developments. The Springer Handbook of Bio-/Neuroinformatics can be used as both a textbook and as a reference for postgraduate study and advanced research in these areas. The target audience includes students, scientists, and practitioners from the areas of information, biological and neurosciences. With Forewords by Shun-ichi Amari of the Brain Science Institute, RIKEN, Saitama and Karlheinz Meier of the University of Heidelberg, Kirchhoff-Institute of Physics and Co-Director of the Human Brain Project.
Statistical Analysis Of Multi Cell Recordings Linking Population Coding Models To Experimental Data
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Author : Matthias Bethge
language : en
Publisher: Frontiers E-books
Release Date : 2012-01-01
Statistical Analysis Of Multi Cell Recordings Linking Population Coding Models To Experimental Data written by Matthias Bethge and has been published by Frontiers E-books this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-01-01 with categories.
Modern recording techniques such as multi-electrode arrays and 2-photon imaging are capable of simultaneously monitoring the activity of large neuronal ensembles at single cell resolution. This makes it possible to study the dynamics of neural populations of considerable size, and to gain insights into their computations and functional organization. The key challenge with multi-electrode recordings is their high-dimensional nature. Understanding this kind of data requires powerful statistical techniques for capturing the structure of the neural population responses and their relation with external stimuli or behavioral observations. Contributions to this Research Topic should advance statistical modeling of neural populations. Questions of particular interest include: 1. What classes of statistical methods are most useful for modeling population activity? 2. What are the main limitations of current approaches, and what can be done to overcome them? 3. How can statistical methods be used to empirically test existing models of (probabilistic) population coding? 4. What role can statistical methods play in formulating novel hypotheses about the principles of information processing in neural populations? This Research Topic is connected to a one day workshop at the Computational Neuroscience Meeting 2009 in Berlin (http://www.cnsorg.org/2009/workshops.shtml and http://www.kyb.tuebingen.mpg.de/bethge/workshops/cns2009/)
Spikes
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Author : Fred Rieke
language : en
Publisher: MIT Press (MA)
Release Date : 1997
Spikes written by Fred Rieke and has been published by MIT Press (MA) this book supported file pdf, txt, epub, kindle and other format this book has been release on 1997 with Medical categories.
Intended for neurobiologists with an interest in mathematical analysis of neural data as well as the growing number of physicists and mathematicians interested in information processing by "real" nervous systems, Spikes provides a self-contained review of relevant concepts in information theory and statistical decision theory.
The Hidden Life Of The Basal Ganglia
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Author : Hagai Bergman
language : en
Publisher: MIT Press
Release Date : 2021-10-12
The Hidden Life Of The Basal Ganglia written by Hagai Bergman and has been published by MIT Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-10-12 with Science categories.
The anatomy and physiology of the basal ganglia and their relation to brain and behavior, disorders and therapies, and philosophy of mind and moral values. The main task of the basal ganglia—a group of subcortical nuclei, located at the base of the brain—is to optimize and execute our automatic behavior. In this book, Hagai Bergman analyzes the anatomy and physiology of the basal ganglia, discussing their relation to brain and behavior, to disorders and therapies, and even to moral values. Drawing on his forty years of studying the basal ganglia, Bergman presents new information on physiology and computational models, Parkinson’s disease and other ganglia-related disorders, and such therapies as deep brain stimulation. Focusing on studies of nonhuman primates and human basal ganglia and relying on system physiology and in vivo extra-cellular recording techniques, Bergman first describes the major brain structures that constitute the basal ganglia, the morphology of their cellular elements, their synaptic connectivity and their physiological function in health and disease. He discusses the computational physiology of the healthy basal ganglia, describing four generations of computational models, and then traces the computational physiology of basal ganglia–related disorders and their treatments, including Parkinson’s disease and its pharmacological and surgical therapies. Finally, Bergman considers the implications of these findings for such moral concerns as free will. Explaining this leap into domains rarely explored in neuroscientific accounts, Bergman writes that the longer he studies the basal ganglia, the more he is convinced that they are truly the base of both brain and mind.
Correlated Neuronal Activity And Its Relationship To Coding Dynamics And Network Architecture
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Author : Tatjana Tchumatchenko
language : en
Publisher: Frontiers E-books
Release Date : 2014-12-03
Correlated Neuronal Activity And Its Relationship To Coding Dynamics And Network Architecture written by Tatjana Tchumatchenko and has been published by Frontiers E-books this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-12-03 with Brain function categories.
Correlated activity in populations of neurons has been observed in many brain regions and plays a central role in cortical coding, attention, and network dynamics. Accurately quantifying neuronal correlations presents several difficulties. For example, despite recent advances in multicellular recording techniques, the number of neurons from which spiking activity can be simultaneously recorded remains orders magnitude smaller than the size of local networks. In addition, there is a lack of consensus on the distribution of pairwise spike cross correlations obtained in extracellular multi-unit recordings. These challenges highlight the need for theoretical and computational approaches to understand how correlations emerge and to decipher their functional role in the brain.
Case Studies In Neural Data Analysis
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Author : Mark A. Kramer
language : en
Publisher: MIT Press
Release Date : 2016-11-04
Case Studies In Neural Data Analysis written by Mark A. Kramer and has been published by MIT Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-11-04 with Science categories.
A practical guide to neural data analysis techniques that presents sample datasets and hands-on methods for analyzing the data. As neural data becomes increasingly complex, neuroscientists now require skills in computer programming, statistics, and data analysis. This book teaches practical neural data analysis techniques by presenting example datasets and developing techniques and tools for analyzing them. Each chapter begins with a specific example of neural data, which motivates mathematical and statistical analysis methods that are then applied to the data. This practical, hands-on approach is unique among data analysis textbooks and guides, and equips the reader with the tools necessary for real-world neural data analysis. The book begins with an introduction to MATLAB, the most common programming platform in neuroscience, which is used in the book. (Readers familiar with MATLAB can skip this chapter and might decide to focus on data type or method type.) The book goes on to cover neural field data and spike train data, spectral analysis, generalized linear models, coherence, and cross-frequency coupling. Each chapter offers a stand-alone case study that can be used separately as part of a targeted investigation. The book includes some mathematical discussion but does not focus on mathematical or statistical theory, emphasizing the practical instead. References are included for readers who want to explore the theoretical more deeply. The data and accompanying MATLAB code are freely available on the authors' website. The book can be used for upper-level undergraduate or graduate courses or as a professional reference. A version of this textbook with all of the examples in Python is available on the MIT Press website.
Dynamic Brain From Neural Spikes To Behaviors
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Author : Maria Marinaro
language : en
Publisher: Springer Science & Business Media
Release Date : 2008-10-23
Dynamic Brain From Neural Spikes To Behaviors written by Maria Marinaro and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008-10-23 with Computers categories.
This book is devoted to graduate students and researchers with different scientific background (including physics, mathematics, biology, neuroscience, etc.) who wish to learn brain science beyond the boundary of their fields. The volume presents 12 thoroughly revised tutorial papers based on lectures given by leading researchers at the 12th International Summer School on Neural Networks in Erice, Italy, in December 2007. The 12 invited and contributed papers presented provide primarily high-level tutorial coverage of the fields related to neuraldynamics, reporting recent experimental and theoretical results investigating the role of collective dynamics in hippocampal and parahippocampal regions and in the mammalian olfactory system. The book is divided into topical sections on hippocampus and neural oscillations, dynamics in olfactory system and behaviour, correlation structure of spiking trains, and neural network theories on associative memory.
Nanotechnology And Neuroscience Nano Electronic Photonic And Mechanical Neuronal Interfacing
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Author : Massimo De Vittorio
language : en
Publisher: Springer
Release Date : 2014-07-08
Nanotechnology And Neuroscience Nano Electronic Photonic And Mechanical Neuronal Interfacing written by Massimo De Vittorio and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-07-08 with Technology & Engineering categories.
This book describes the use of modern micro- and nanofabrication technologies to develop improved tools for stimulating and recording electrical activity in neuronal networks. It provides an overview of the different ways in which the “nano-world” can be beneficial for neuroscientists, including improvement of mechanical adhesion of cells on electrodes, tight-sealed extracellular recordings or intracellular approaches with strongly reduced invasiveness and tools for localized electrical or optical stimulation in optogenetics experiments. Specific discussion of fabrication strategies is included, to provide a comprehensive guide to develop micro and nanostructured tools for biological applications. A perspective on integrating these devices with state-of-the-art technologies for large-scale in vitro and in vivo experiments completes the picture of neuronal interfacing with micro- and nanostructures.