Comparative Gene Finding
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Comparative Gene Finding
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Author : Marina Axelson-Fisk
language : en
Publisher: Springer
Release Date : 2015-04-13
Comparative Gene Finding written by Marina Axelson-Fisk and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-04-13 with Computers categories.
This book presents a guide to building computational gene finders, and describes the state of the art in computational gene finding methods, with a focus on comparative approaches. Fully updated and expanded, this new edition examines next-generation sequencing (NGS) technology. The book also discusses conditional random fields, enhancing the broad coverage of topics spanning probability theory, statistics, information theory, optimization theory and numerical analysis. Features: introduces the fundamental terms and concepts in the field; discusses algorithms for single-species gene finding, and approaches to pairwise and multiple sequence alignments, then describes how the strengths in both areas can be combined to improve the accuracy of gene finding; explores the gene features most commonly captured by a computational gene model, and explains the basics of parameter training; illustrates how to implement a comparative gene finder; examines NGS techniques and how to build a genome annotation pipeline.
A Comparative Gene Finding Approach For Higher Eukaryotes
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Author : Jonathan Ellery Moore
language : en
Publisher:
Release Date : 2003
A Comparative Gene Finding Approach For Higher Eukaryotes written by Jonathan Ellery Moore and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with categories.
Handbook Of Comparative Genomics
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Author : Cecilia Saccone
language : en
Publisher: John Wiley & Sons
Release Date : 2003-02-07
Handbook Of Comparative Genomics written by Cecilia Saccone and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-02-07 with Science categories.
This comprehensive reference covers the comparative methodology involved in studying molecular evolution. Providing a practical introduction to the role of bioinformatics in comparative genomics, this publication further discusses the basic technology used in genome sequencing projects and provides an overview of genome storage databases currently in use. This timely and cutting-edge text also: * Reviews the basic principles of genomics and gene expression analysis * Discusses analytic methods in proteomics and transcriptomics * Includes a comprehensive list of Web resource
Comparative Genomics
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Author : Nicholas H. Bergman
language : en
Publisher: Springer Science & Business Media
Release Date : 2007-11-29
Comparative Genomics written by Nicholas H. Bergman and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-11-29 with Medical categories.
This volume provides a collection of robust protocols for molecular biologists studying comparative genomics. Given the tremendous increase in available biosequence data over the past ten years, this volume is timely, comprehensive, and novel. The volume is intended for molecular biologists, biochemists and geneticists.
On Gene Prediction By Cross Species Comparative Sequence Analysis
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Author : Rong Chen
language : en
Publisher:
Release Date : 2003
On Gene Prediction By Cross Species Comparative Sequence Analysis written by Rong Chen and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with Dynamic programming categories.
Gene Prediction By Combining Outputs From Exonhunter And Sgp2
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Author : Yujing Kuai
language : en
Publisher:
Release Date : 2009
Gene Prediction By Combining Outputs From Exonhunter And Sgp2 written by Yujing Kuai and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with categories.
Sequence Evolution Function
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Author : Eugene V. Koonin
language : en
Publisher: Springer Science & Business Media
Release Date : 2013-06-29
Sequence Evolution Function written by Eugene V. Koonin and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-06-29 with Science categories.
Sequence - Evolution - Function is an introduction to the computational approaches that play a critical role in the emerging new branch of biology known as functional genomics. The book provides the reader with an understanding of the principles and approaches of functional genomics and of the potential and limitations of computational and experimental approaches to genome analysis. Sequence - Evolution - Function should help bridge the "digital divide" between biologists and computer scientists, allowing biologists to better grasp the peculiarities of the emerging field of Genome Biology and to learn how to benefit from the enormous amount of sequence data available in the public databases. The book is non-technical with respect to the computer methods for genome analysis and discusses these methods from the user's viewpoint, without addressing mathematical and algorithmic details. Prior practical familiarity with the basic methods for sequence analysis is a major advantage, but a reader without such experience will be able to use the book as an introduction to these methods. This book is perfect for introductory level courses in computational methods for comparative and functional genomics.
Methods For Computational Gene Prediction
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Author : William H. Majoros
language : en
Publisher:
Release Date : 2007-08-16
Methods For Computational Gene Prediction written by William H. Majoros and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-08-16 with Computers categories.
A self-contained, rigorous text describing models used to identify genes in genomic DNA sequences.
Three Variations On The Theme Of Comparative Genomics
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Author : Kevin Christopher Chen
language : en
Publisher:
Release Date : 2005
Three Variations On The Theme Of Comparative Genomics written by Kevin Christopher Chen and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2005 with categories.
Comparative Gene Finding
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Author : Marina Axelson-Fisk
language : en
Publisher: Springer Science & Business Media
Release Date : 2010-01-30
Comparative Gene Finding written by Marina Axelson-Fisk and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-01-30 with Science categories.
Comparative genomics is a new and emerging ?eld, and with the explosion of ava- able biological sequences the requests for faster, more ef?cient and more robust algorithms to analyze all this data are immense. This book is meant to serve as a self-contained instruction of the state-of-the-art of computational gene ?nding in general and of comparative approaches in particular. It is meant as an overview of the various methods that have been applied in the ?eld, and a quick introduction into how computational gene ?nders are built in general. A beginner to the ?eld could use this book as a guide through to the main points to think about when constructing a gene ?nder, and the main algorithms that are in use. On the other hand, the more experienced gene ?nder should be able to use this book as a reference to different methods and to the main components incorporated in these methods. I have focused on the main uses of the covered methods and avoided much of the technical details and general extensions of the models. In exchange I have tried to supply references to more detailed accounts of the different research areas touched upon. The book, however, makes no claim on being comprehensive.