Data Driven Modelling Of Structured Populations
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Data Driven Modelling Of Structured Populations
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Author : Stephen P. Ellner
language : en
Publisher: Springer
Release Date : 2016-05-13
Data Driven Modelling Of Structured Populations written by Stephen P. Ellner and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-05-13 with Mathematics categories.
This book is a “How To” guide for modeling population dynamics using Integral Projection Models (IPM) starting from observational data. It is written by a leading research team in this area and includes code in the R language (in the text and online) to carry out all computations. The intended audience are ecologists, evolutionary biologists, and mathematical biologists interested in developing data-driven models for animal and plant populations. IPMs may seem hard as they involve integrals. The aim of this book is to demystify IPMs, so they become the model of choice for populations structured by size or other continuously varying traits. The book uses real examples of increasing complexity to show how the life-cycle of the study organism naturally leads to the appropriate statistical analysis, which leads directly to the IPM itself. A wide range of model types and analyses are presented, including model construction, computational methods, and the underlying theory, with the more technical material in Boxes and Appendices. Self-contained R code which replicates all of the figures and calculations within the text is available to readers on GitHub. Stephen P. Ellner is Horace White Professor of Ecology and Evolutionary Biology at Cornell University, USA; Dylan Z. Childs is Lecturer and NERC Postdoctoral Fellow in the Department of Animal and Plant Sciences at The University of Sheffield, UK; Mark Rees is Professor in the Department of Animal and Plant Sciences at The University of Sheffield, UK.
Stage Structured Populations
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Author : Bryan Manly
language : en
Publisher: Springer Science & Business Media
Release Date : 2013-03-09
Stage Structured Populations written by Bryan Manly and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-03-09 with Science categories.
This book provides a review of methods for obtaining and analysing data from stage-structured biological populations. The topics covered are sam pling designs (Chapter 2), the estimation of parameters by maximum likelihood (Chapter 3), the analysis of sample counts of the numbers cif individuals in different stages at different times (Chapters 4 and 5), the analysis of data using Leslie matrix types of model (Chapter 6) and key factor analysis (Chapter 7). There is also some discussion of the approaches to modelling and estimation that have been used in five studies of particular populations (Chapter 8). There is a large literature on the modelling of biological populations, and a multitude of different approaches have been used in this area. The various approaches can be classified in different ways (Southwood, 1978, ch. 12), but for the purposes of this book it is convenient to think of the three categories mathematical, statistical and predictive modelling. Mathematical modelling is concerned largely with developing models that capture the most important qualitative features of population dynamics. In this case, the models that are developed do not have to be compared with data from natural populations. As representations of idealized systems, they can be quite informative in showing the effects of changing parameters, indicating what factors are most important in promoting stability, and so on.
Demographic Methods Across The Tree Of Life
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Author : Roberto Salguero-Gomez
language : en
Publisher: Oxford University Press
Release Date : 2021-08-31
Demographic Methods Across The Tree Of Life written by Roberto Salguero-Gomez and has been published by Oxford University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-08-31 with Science categories.
Demography is everywhere in our lives: from birth to death. Indeed, the universal currencies of survival, development, reproduction, and recruitment shape the performance of all species, from microbes to humans. The number of techniques for demographic data acquisition and analyses across the entire tree of life (microbes, fungi, plants, and animals) has drastically increased in recent decades. These developments have been partially facilitated by the advent of technologies such as GIS and drones, as well as analytical methods including Bayesian statistics and high-throughput molecular analyses. However, despite the universality of demography and the significant research potential that could emerge from unifying: (i) questions across taxa, (ii) data collection protocols, and (iii) analytical tools, demographic methods to date have remained taxonomically siloed and methodologically disintegrated. This is the first book to attempt a truly unified approach to demography and population ecology in order to address a wide range of questions in ecology, evolution, and conservation biology across the entire spectrum of life. This novel book provides the reader with the fundamentals of data collection, model construction, analyses, and interpretation across a wide repertoire of demographic techniques and protocols. It introduces the novice demographer to a broad range of demographic methods, including abundance-based models, life tables, matrix population models, integral projection models, integrated population models, individual based models, and more. Through the careful integration of data collection methods, analytical approaches, and applications, clearly guided throughout with fully reproducible R scripts, the book provides an up-to-date and authoritative overview of the most popular and effective demographic tools. Demographic Methods across the Tree of Life is aimed at graduate students and professional researchers in the fields of demography, ecology, animal behaviour, genetics, evolutionary biology, mathematical biology, and wildlife management.
Theoretical Ecology
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Author : Kevin S. McCann
language : en
Publisher: Oxford University Press, USA
Release Date : 2020-04-29
Theoretical Ecology written by Kevin S. McCann and has been published by Oxford University Press, USA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-04-29 with Mathematics categories.
Theoretical Ecology: concepts and applications continues the authoritative and established sequence of theoretical ecology books initiated by Robert M. May which helped pave the way for ecology to become a more robust theoretical science, encouraging the modern biologist to better understand the mathematics behind their theories. This latest instalment builds on the legacy of its predecessors with a completely new set of contributions. Rather than placing emphasis on the historical ideas in theoretical ecology, the Editors have encouraged each contribution to: synthesize historical theoretical ideas within modern frameworks that have emerged in the last 10-20 years (e.g. bridging population interactions to whole food webs); describe novel theory that has emerged in the last 20 years from historical empirical areas (e.g. macro-ecology); and finally to cover the rapidly expanding area of theoretical ecological applications (e.g. disease theory and global change theory). The result is a forward-looking synthesis that will help guide the field through a further decade of discovery and development. It is written for upper level undergraduate students, graduate students, and researchers seeking synthesis and the state of the art in growing areas of interest in theoretical ecology, genetics, evolutionary ecology, and mathematical biology.
Advances In Discrete Dynamical Systems Difference Equations And Applications
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Author : Saber Elaydi
language : en
Publisher: Springer Nature
Release Date : 2023-03-25
Advances In Discrete Dynamical Systems Difference Equations And Applications written by Saber Elaydi and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-03-25 with Mathematics categories.
This book comprises selected papers of the 26th International Conference on Difference Equations and Applications, ICDEA 2021, held virtually at the University of Sarajevo, Bosnia and Herzegovina, in July 2021. The book includes the latest and significant research and achievements in difference equations, discrete dynamical systems, and their applications in various scientific disciplines. The book is interesting for Ph.D. students and researchers who want to keep up to date with the latest research, developments, and achievements in difference equations, discrete dynamical systems, and their applications, the real-world problems.
Statistical Modeling For Naturalists
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Author : Pedro F. Quintana Ascencio
language : en
Publisher: Cambridge Scholars Publishing
Release Date : 2022-01-31
Statistical Modeling For Naturalists written by Pedro F. Quintana Ascencio and has been published by Cambridge Scholars Publishing this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-01-31 with Science categories.
This book will allow naturalists, nature stewards, and graduate students to appreciate and comprehend basic statistical concepts as a bridge to more complex themes relevant to their daily work. Although there are excellent sources on more specialized analytical topics relevant to naturalists, this introductory book makes a connection with the experience and needs of field practitioners. It uses aspects of the natural history of the Florida scrub relevant for conservation and management as examples of analytical issues pertinent to the naturalist in a broader context. Each chapter identifies important ecological questions and then provides approaches to evaluate data, focusing on the analytical decision-making process. The book guides the reader on frequently overlooked aspects such as the understanding of model assumptions, alternative model specifications, model output interpretation, and model limitations.
Unsolved Problems In Ecology
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Author : Andrew Dobson
language : en
Publisher: Princeton University Press
Release Date : 2020-06-02
Unsolved Problems In Ecology written by Andrew Dobson and has been published by Princeton University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-06-02 with Science categories.
"This volume provides a series of essays on open questions in ecology with the overarching goal being to outline to the most important, most interesting or most fundamental problems in ecology that need to be addressed. The contributions span ecological subfields, from behavioral ecology and population ecology to disease ecology and conservation and range in tone from the technical to more personal meditations on the state of the field. Many of the chapters start or end in moments of genuine curiosity, like one which takes up the question of why the world is green or another which asks what might come of a thought experiment in which we "turn-off" evolution entirely"--
Integrodifference Equations In Spatial Ecology
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Author : Frithjof Lutscher
language : en
Publisher: Springer Nature
Release Date : 2019-10-30
Integrodifference Equations In Spatial Ecology written by Frithjof Lutscher and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-10-30 with Mathematics categories.
This book is the first thorough introduction to and comprehensive treatment of the theory and applications of integrodifference equations in spatial ecology. Integrodifference equations are discrete-time continuous-space dynamical systems describing the spatio-temporal dynamics of one or more populations. The book contains step-by-step model construction, explicitly solvable models, abstract theory and numerical recipes for integrodifference equations. The theory in the book is motivated and illustrated by many examples from conservation biology, biological invasions, pattern formation and other areas. In this way, the book conveys the more general message that bringing mathematical approaches and ecological questions together can generate novel insights into applications and fruitful challenges that spur future theoretical developments. The book is suitable for graduate students and experienced researchers in mathematical ecology alike.
Sensitivity Analysis Matrix Methods In Demography And Ecology
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Author : Hal Caswell
language : en
Publisher: Springer
Release Date : 2019-04-02
Sensitivity Analysis Matrix Methods In Demography And Ecology written by Hal Caswell and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-04-02 with Social Science categories.
This open access book shows how to use sensitivity analysis in demography. It presents new methods for individuals, cohorts, and populations, with applications to humans, other animals, and plants. The analyses are based on matrix formulations of age-classified, stage-classified, and multistate population models. Methods are presented for linear and nonlinear, deterministic and stochastic, and time-invariant and time-varying cases. Readers will discover results on the sensitivity of statistics of longevity, life disparity, occupancy times, the net reproductive rate, and statistics of Markov chain models in demography. They will also see applications of sensitivity analysis to population growth rates, stable population structures, reproductive value, equilibria under immigration and nonlinearity, and population cycles. Individual stochasticity is a theme throughout, with a focus that goes beyond expected values to include variances in demographic outcomes. The calculations are easily and accurately implemented in matrix-oriented programming languages such as Matlab or R. Sensitivity analysis will help readers create models to predict the effect of future changes, to evaluate policy effects, and to identify possible evolutionary responses to the environment. Complete with many examples of the application, the book will be of interest to researchers and graduate students in human demography and population biology. The material will also appeal to those in mathematical biology and applied mathematics.
Plant Strategies
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Author : Daniel C. Laughlin
language : en
Publisher: Oxford University Press
Release Date : 2023-07-27
Plant Strategies written by Daniel C. Laughlin and has been published by Oxford University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-07-27 with Science categories.
How do plants make a living? Some plants are gamblers, others are swindlers. Some plants are habitual spenders while others are strugglers and miserly savers. Plants have evolved a spectacular array of solutions to the existential problems of survival and reproduction in a world where resources are scarce, disturbances can be deadly, and competition is cut-throat. Few topics have both captured the imagination and furrowed the brows of plant ecologists, yet no topic is more important for understanding the assembly of plant communities, predicting plant responses to global change, and enhancing the restoration of our rapidly degrading biosphere. The vast array of plant strategy models that characterize the discipline now require synthesis. These models tend to emphasize either life history strategies based on demography, or functional strategies based on ecophysiology. Indeed, this disciplinary divide between demography and physiology runs deep and continues to this today. The goal of this accessible book is to articulate a coherent framework that unifies life history theory with comparative functional ecology to advance prediction in plant ecology. Armed with a deeper understanding of the dimensionality of life history and functional traits, we are now equipped to quantitively link phenotypes to population growth rates across gradients of resource availability and disturbance regimes. Predicting how species respond to global change is perhaps the most important challenge of our time. A robust framework for plant strategy theory will advance this research agenda by testing the generality of traits for predicting population dynamics.