Fundamentals Of Network Biology
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Fundamentals Of Network Biology
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Author : Wenjun Zhang
language : en
Publisher: World Scientific
Release Date : 2018-05-18
Fundamentals Of Network Biology written by Wenjun Zhang and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-05-18 with Medical categories.
As the first comprehensive title on network biology, this book covers a wide range of subjects including scientific fundamentals (graphs, networks, etc) of network biology, construction and analysis of biological networks, methods for identifying crucial nodes in biological networks, link prediction, flow analysis, network dynamics, evolution, simulation and control, ecological networks, social networks, molecular and cellular networks, network pharmacology and network toxicology, big data analytics, and more.Across 12 parts and 26 chapters, with Matlab codes provided for most models and algorithms, this self-contained title provides an in-depth and complete insight on network biology. It is a valuable read for high-level undergraduates and postgraduates in the areas of biology, ecology, environmental sciences, medical science, computational science, applied mathematics, and social science.
Networks
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Author : Mark Newman
language : en
Publisher: OUP Oxford
Release Date : 2010-03-25
Networks written by Mark Newman and has been published by OUP Oxford this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-03-25 with Science categories.
The scientific study of networks, including computer networks, social networks, and biological networks, has received an enormous amount of interest in the last few years. The rise of the Internet and the wide availability of inexpensive computers have made it possible to gather and analyze network data on a large scale, and the development of a variety of new theoretical tools has allowed us to extract new knowledge from many different kinds of networks. The study of networks is broadly interdisciplinary and important developments have occurred in many fields, including mathematics, physics, computer and information sciences, biology, and the social sciences. This book brings together for the first time the most important breakthroughs in each of these fields and presents them in a coherent fashion, highlighting the strong interconnections between work in different areas. Subjects covered include the measurement and structure of networks in many branches of science, methods for analyzing network data, including methods developed in physics, statistics, and sociology, the fundamentals of graph theory, computer algorithms, and spectral methods, mathematical models of networks, including random graph models and generative models, and theories of dynamical processes taking place on networks.
Foundations Of Chemical Reaction Network Theory
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Author : Martin Feinberg
language : en
Publisher: Springer
Release Date : 2019-01-31
Foundations Of Chemical Reaction Network Theory written by Martin Feinberg and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-01-31 with Mathematics categories.
This book provides an authoritative introduction to the rapidly growing field of chemical reaction network theory. In particular, the book presents deep and surprising theorems that relate the graphical and algebraic structure of a reaction network to qualitative properties of the intricate system of nonlinear differential equations that the network induces. Over the course of three main parts, Feinberg provides a gradual transition from a tutorial on the basics of reaction network theory, to a survey of some of its principal theorems, and, finally, to a discussion of the theory’s more technical aspects. Written with great clarity, this book will be of value to mathematicians and to mathematically-inclined biologists, chemists, physicists, and engineers who want to contribute to chemical reaction network theory or make use of its powerful results.
Fundamentals Of Brain Network Analysis
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Author : Alex Fornito
language : en
Publisher: Academic Press
Release Date : 2016-03-04
Fundamentals Of Brain Network Analysis written by Alex Fornito and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-03-04 with Medical categories.
Fundamentals of Brain Network Analysis is a comprehensive and accessible introduction to methods for unraveling the extraordinary complexity of neuronal connectivity. From the perspective of graph theory and network science, this book introduces, motivates and explains techniques for modeling brain networks as graphs of nodes connected by edges, and covers a diverse array of measures for quantifying their topological and spatial organization. It builds intuition for key concepts and methods by illustrating how they can be practically applied in diverse areas of neuroscience, ranging from the analysis of synaptic networks in the nematode worm to the characterization of large-scale human brain networks constructed with magnetic resonance imaging. This text is ideally suited to neuroscientists wanting to develop expertise in the rapidly developing field of neural connectomics, and to physical and computational scientists wanting to understand how these quantitative methods can be used to understand brain organization. - Winner of the 2017 PROSE Award in Biomedicine & Neuroscience and the 2017 British Medical Association (BMA) Award in Neurology - Extensively illustrated throughout by graphical representations of key mathematical concepts and their practical applications to analyses of nervous systems - Comprehensively covers graph theoretical analyses of structural and functional brain networks, from microscopic to macroscopic scales, using examples based on a wide variety of experimental methods in neuroscience - Designed to inform and empower scientists at all levels of experience, and from any specialist background, wanting to use modern methods of network science to understand the organization of the brain
Modeling In Systems Biology
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Author : Ina Koch
language : en
Publisher: Springer Science & Business Media
Release Date : 2010-10-21
Modeling In Systems Biology written by Ina Koch and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-10-21 with Computers categories.
The emerging, multi-disciplinary field of systems biology is devoted to the study of the relationships between various parts of a biological system, and computer modeling plays a vital role in the drive to understand the processes of life from an holistic viewpoint. Advancements in experimental technologies in biology and medicine have generated an enormous amount of biological data on the dependencies and interactions of many different molecular cell processes, fueling the development of numerous computational methods for exploring this data. The mathematical formalism of Petri net theory is able to encompass many of these techniques. This essential text/reference presents a comprehensive overview of cutting-edge research in applications of Petri nets in systems biology, with contributions from an international selection of experts. Those unfamiliar with the field are also provided with a general introduction to systems biology, the foundations of biochemistry, and the basics of Petri net theory. Further chapters address Petri net modeling techniques for building and analyzing biological models, as well as network prediction approaches, before reviewing the applications to networks of different biological classification. Topics and features: investigates the modular, qualitative modeling of regulatory networks using Petri nets, and examines an Hybrid Functional Petri net simulation case study; contains a glossary of the concepts and notation used in the book, in addition to exercises at the end of each chapter; covers the topological analysis of metabolic and regulatory networks, the analysis of models of signaling networks, and the prediction of network structure; provides a biological case study on the conversion of logical networks into Petri nets; discusses discrete modeling, stochastic modeling, fuzzy modeling, dynamic pathway modeling, genetic regulatory network modeling, and quantitative analysis techniques; includes a Foreword by Professor Jens Reich, Professor of Bioinformatics at Humboldt University and Max Delbrück Center for Molecular Medicine in Berlin. This unique guide to the modeling of biochemical systems using Petri net concepts will be of real utility to researchers and students of computational biology, systems biology, bioinformatics, computer science, and biochemistry.
Network Science
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Author : Ted G. Lewis
language : en
Publisher: John Wiley & Sons
Release Date : 2011-09-20
Network Science written by Ted G. Lewis and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-09-20 with Computers categories.
A comprehensive look at the emerging science of networks Network science helps you design faster, more resilient communication networks; revise infrastructure systems such as electrical power grids, telecommunications networks, and airline routes; model market dynamics; understand synchronization in biological systems; and analyze social interactions among people. This is the first book to take a comprehensive look at this emerging science. It examines the various kinds of networks (regular, random, small-world, influence, scale-free, and social) and applies network processes and behaviors to emergence, epidemics, synchrony, and risk. The book's uniqueness lies in its integration of concepts across computer science, biology, physics, social network analysis, economics, and marketing. The book is divided into easy-to-understand topical chapters and the presentation is augmented with clear illustrations, problems and answers, examples, applications, tutorials, and a discussion of related Java software. Chapters cover: Origins Graphs Regular Networks Random Networks Small-World Networks Scale-Free Networks Emergence Epidemics Synchrony Influence Networks Vulnerability Net Gain Biology This book offers a new understanding and interpretation of the field of network science. It is an indispensable resource for researchers, professionals, and technicians in engineering, computing, and biology. It also serves as a valuable textbook for advanced undergraduate and graduate courses in related fields of study.
Mathematical Foundations Of Data Science Using R
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Author : Frank Emmert-Streib
language : en
Publisher: Walter de Gruyter GmbH & Co KG
Release Date : 2022-10-24
Mathematical Foundations Of Data Science Using R written by Frank Emmert-Streib and has been published by Walter de Gruyter GmbH & Co KG this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-10-24 with Computers categories.
The aim of the book is to help students become data scientists. Since this requires a series of courses over a considerable period of time, the book intends to accompany students from the beginning to an advanced understanding of the knowledge and skills that define a modern data scientist. The book presents a comprehensive overview of the mathematical foundations of the programming language R and of its applications to data science.
Bioinformatics And Computational Biology
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Author : Tiratha Raj Singh
language : en
Publisher: CRC Press
Release Date : 2023-12-13
Bioinformatics And Computational Biology written by Tiratha Raj Singh and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-12-13 with Computers categories.
Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities is an invaluable resource for general and applied researchers who analyze biological data that is generated, at an unprecedented rate, at the global level. After careful evaluation of the requirements for current trends in bioinformatics and computational biology, it is anticipated that the book will provide an insightful resource to the academic and scientific community. Through a myriad of computational resources, algorithms, and methods, it equips readers with the confidence to both analyze biological data and estimate predictions. The book offers comprehensive coverage of the most essential and emerging topics: Cloud-based monitoring of bioinformatics multivariate data with cloud platforms Machine learning and deep learning in bioinformatics Quantum machine learning for biological applications Integrating machine learning strategies with multiomics to augment prognosis in chronic diseases Biomedical engineering Next generation sequencing techniques and applications Computational systems biology and molecular evolution While other books may touch on some of the same issues and nuances of biological data analysis, they neglect to feature bioinformatics and computational biology exclusively, and as exhaustively. This book's abundance of several subtopics related to almost all of the regulatory activities of biomolecules from where real data is being generated brings an added dimension.
Artificial Neural Networks In Biological And Environmental Analysis
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Author : Grady Hanrahan
language : en
Publisher: CRC Press
Release Date : 2011-01-18
Artificial Neural Networks In Biological And Environmental Analysis written by Grady Hanrahan and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-01-18 with Mathematics categories.
Originating from models of biological neural systems, artificial neural networks (ANN) are the cornerstones of artificial intelligence research. Catalyzed by the upsurge in computational power and availability, and made widely accessible with the co-evolution of software, algorithms, and methodologies, artificial neural networks have had a profound
Complex Networks
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Author : Eli Ben-Naim
language : en
Publisher: Springer Science & Business Media
Release Date : 2004-09-01
Complex Networks written by Eli Ben-Naim and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004-09-01 with Science categories.
This volume is devoted to the applications of techniques from statistical physics to the characterization and modeling of complex networks. The first two parts of the book concern theory and modeling of networks, the last two parts survey applications to a wide variety of natural and artificial networks. The tutorial reviews that form this book are aimed at students and newcomers to the field, and will also constitute a modern and comprehensive reference for experts. To this aim, all contributions have been carefully peer-reviewed not only for scientific content but also for self-consistency and readability.