Introdu O Programa O Para Bioinform Tica Com Perl
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Bioinformatics Biocomputing And Perl
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Author : Michael Moorhouse
language : en
Publisher: John Wiley & Sons
Release Date : 2005-09-27
Bioinformatics Biocomputing And Perl written by Michael Moorhouse and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2005-09-27 with Medical categories.
Bioinformatics, Biocomputing and Perl presents a modern introduction to bioinformatics computing skills and practice. Structuring its presentation around four main areas of study, this book covers the skills vital to the day-to-day activities of today’s bioinformatician. Each chapter contains a series of maxims designed to highlight key points and there are exercises to supplement and cement the introduced material. Working with Perl presents an extended tutorial introduction to programming through Perl, the premier programming technology of the bioinformatics community. Even though no previous programming experience is assumed, completing the tutorial equips the reader with the ability to produce powerful custom programs with ease. Working with Data applies the programming skills acquired to processing a variety of bioinformatics data. In addition to advice on working with important data stores such as the Protein DataBank, SWISS-PROT, EMBL and the GenBank, considerable discussion is devoted to using bioinformatics data to populate relational database systems. The popular MySQL database is used in all examples. Working with the Web presents a discussion of the Web-based technologies that allow the bioinformatics researcher to publish both data and applications on the Internet. Working with Applications shifts gear from creating custom programs to using them. The tools described include Clustal-W, EMBOSS, STRIDE, BLAST and Xmgrace. An introduction to the important Bioperl Project concludes this chapter and rounds off the book.
Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001
Beginning Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001 with Computers categories.
This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with the skills to tackle more advanced bioinformatics programming.
Perl Programming For Biologists
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Author : D. Curtis Jamison
language : en
Publisher: John Wiley & Sons
Release Date : 2003-07-14
Perl Programming For Biologists written by D. Curtis Jamison and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-07-14 with Medical categories.
Working on the assumption that the reader has no formal training in programming, Perl Programming for Biologists demonstrates how Perl is used to solve biological problems. Each chapter opens with a set of learning objectives, provides numerous review questions and self-study exercises, and concludes with a bulleted summary of key points. The author incorporates numerous real-life examples throughout the text. Upon completing the book, readers are able to quickly perform such tasks as correcting recurring errors in spreadsheets, scanning a Fasta sequence for every occurrence of an EcoRI site, adapting other writers' scripts to one's own purposes, and most important, writing reusable and maintainable scripts that spare the rote repetition of code.
Mastering Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2003-09-25
Mastering Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-09-25 with Computers categories.
Historically, programming hasn't been considered a critical skill for biologists. But now, with access to vast amounts of biological data contained in public databases, programming skills are increasingly in strong demand in biology research and development. Perl, with its highly developed capacities in string handling, text processing, networking, and rapid prototyping, has emerged as the programming language of choice for biological data analysis.Mastering Perl for Bioinformatics covers the core Perl language and many of its module extensions, presenting them in the context of biological data and problems of pressing interest to the biological community. This book, along with Beginning Perl for Bioinformatics, forms a basic course in Perl programming. This second volume finishes the basic Perl tutorial material (references, complex data structures, object-oriented programming, use of modules--all presented in a biological context) and presents some advanced topics of considerable interest in bioinformatics.The range of topics covered in Mastering Perl for Bioinformatics prepares the reader for enduring and emerging developments in critical areas of bioinformatics programming such as: Gene finding String alignment Methods of data storage and retrieval (SML and databases) Modeling of networks (graphs and Petri nets) Graphics (Tk) Parallelization Interfacing with other programming languages Statistics (PDL) Protein structure determination Biological models of computation (DNA Computers) Biologists and computer scientists who have conquered the basics of Perl and are ready to move even further in their mastery of this versatile language will appreciate the author's well-balanced approach to applying Perl's analytical abilities to the field of bioinformatics. Full of practical examples and real-world biological problem solving, this book is a must for any reader wanting to move beyond beginner level Perl in bioinformatics.
Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher:
Release Date : 2001-01-01
Beginning Perl For Bioinformatics written by James Tisdall and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-01-01 with Computers categories.
Discusses the ties between biology and computer science, how to program, basic PERL programming concepts, and how to use PERL to perform tasks including analyzing genetic codes.
Beginning Perl For Bioinformatics
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Author : James D. Tisdall
language : en
Publisher:
Release Date : 1991
Beginning Perl For Bioinformatics written by James D. Tisdall and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 1991 with categories.
The Programming Language Perl For Biologists
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Author : Asheesh Shanker
language : en
Publisher: GRIN Verlag
Release Date : 2015-03-02
The Programming Language Perl For Biologists written by Asheesh Shanker and has been published by GRIN Verlag this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-03-02 with Computers categories.
Document from the year 2015 in the subject Computer Science - Programming, , course: Bioinformatics, language: English, abstract: This book is designed to be useful in theory and practical classes of UG and PG bioinformatics students. Moreover, it will be beneficial to other persons who wish to learn Perl programming language. To explain the Perl jargon, program based approach is used throughout the book. Important points are provided at the end of each chapter along with questions to test the skills. Solutions of find errors are provided at the end of the book. All the programs are tested on Windows 7 with Perl v5.18.1. The book is divided into thirteen chapters which gradually take a reader from basic to advanced Perl. Although the book has been drafted with utmost care, it is quite possible that some errors/misprints might have crept in the book. I request the readers for their valuable suggestions and comments for further improvement of the book.
Basics In Perl And Bioperl
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Author : Kaladhar DSVGK
language : en
Publisher: GRIN Verlag
Release Date : 2014-02-10
Basics In Perl And Bioperl written by Kaladhar DSVGK and has been published by GRIN Verlag this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-02-10 with Medical categories.
Document from the year 2014 in the subject Computer Science - Bioinformatics, , language: English, abstract: PERL and BioPERL are the programming languages that are very important for Biological researchers who are working in computational biology. The programs provide the basic knowledge in both theory and practical applications. The introduction provides the basics on these programming languages and the execution in windows.
Perl For Bioinformatics
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Author : Andrew Martin
language : en
Publisher: Garland Science
Release Date : 2014-01-01
Perl For Bioinformatics written by Andrew Martin and has been published by Garland Science this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-01-01 with categories.
Genomic Pearl 1b1cdr
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Author : Rex A Dwyer
language : en
Publisher:
Release Date : 2003
Genomic Pearl 1b1cdr written by Rex A Dwyer and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with categories.
This introduction to computational molecular biology will help programmers and biologists learn the skills needed to start work in this important, expanding field. The author explains many of the basic computational problems and gives concise, working programs to solve them in the Perl programming language. With minimal prerequisites, the author explains the biological background for each problem, develops a model for the solution, then introduces the Perl concepts needed to implement the solution. The book covers pairwise and multiple sequence alignment, fast database searches for homologous sequences, protein motif identification, genome rearrangement, physical mapping, phylogeny reconstruction, satellite identification, sequence assembly, gene finding, and RNA secondary structure. The concrete examples and step-by-step approach make it easy to grasp the computational and statistical methods, including dynamic programming, branch-and-bound optimization, greedy methods, maximum likelihood methods, substitution matrices, BLAST searching, and Karlin-Altschul statistics. Perl code is provided on the accompanying CD.