Parallel Computing For Bioinformatics And Computational Biology

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Parallel Computing For Bioinformatics And Computational Biology

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Author : Albert Y. Zomaya
language : en
Publisher: John Wiley & Sons
Release Date : 2006-04-14

Parallel Computing For Bioinformatics And Computational Biology written by Albert Y. Zomaya and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-04-14 with Computers categories.

Discover how to streamline complex bioinformatics applications with parallel computing This publication enables readers to handle more complex bioinformatics applications and larger and richer data sets. As the editor clearly shows, using powerful parallel computing tools can lead to significant breakthroughs in deciphering genomes, understanding genetic disease, designing customized drug therapies, and understanding evolution. A broad range of bioinformatics applications is covered with demonstrations on how each one can be parallelized to improve performance and gain faster rates of computation. Current parallel computing techniques and technologies are examined, including distributed computing and grid computing. Readers are provided with a mixture of algorithms, experiments, and simulations that provide not only qualitative but also quantitative insights into the dynamic field of bioinformatics. Parallel Computing for Bioinformatics and Computational Biology is a contributed work that serves as a repository of case studies, collectively demonstrating how parallel computing streamlines difficult problems in bioinformatics and produces better results. Each of the chapters is authored by an established expert in the field and carefully edited to ensure a consistent approach and high standard throughout the publication. The work is organized into five parts: * Algorithms and models * Sequence analysis and microarrays * Phylogenetics * Protein folding * Platforms and enabling technologies Researchers, educators, and students in the field of bioinformatics will discover how high-performance computing can enable them to handle more complex data sets, gain deeper insights, and make new discoveries.

Parallel Computing For Bioinformatics And Computational Biology

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Author : Albert Y. Zomaya
language : en
Publisher: John Wiley & Sons
Release Date : 2006-04-21

Parallel Computing For Bioinformatics And Computational Biology written by Albert Y. Zomaya and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-04-21 with Computers categories.

Discover how to streamline complex bioinformatics applications with parallel computing This publication enables readers to handle more complex bioinformatics applications and larger and richer data sets. As the editor clearly shows, using powerful parallel computing tools can lead to significant breakthroughs in deciphering genomes, understanding genetic disease, designing customized drug therapies, and understanding evolution. A broad range of bioinformatics applications is covered with demonstrations on how each one can be parallelized to improve performance and gain faster rates of computation. Current parallel computing techniques and technologies are examined, including distributed computing and grid computing. Readers are provided with a mixture of algorithms, experiments, and simulations that provide not only qualitative but also quantitative insights into the dynamic field of bioinformatics. Parallel Computing for Bioinformatics and Computational Biology is a contributed work that serves as a repository of case studies, collectively demonstrating how parallel computing streamlines difficult problems in bioinformatics and produces better results. Each of the chapters is authored by an established expert in the field and carefully edited to ensure a consistent approach and high standard throughout the publication. The work is organized into five parts: * Algorithms and models * Sequence analysis and microarrays * Phylogenetics * Protein folding * Platforms and enabling technologies Researchers, educators, and students in the field of bioinformatics will discover how high-performance computing can enable them to handle more complex data sets, gain deeper insights, and make new discoveries.

Grid Computing For Bioinformatics And Computational Biology

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Author : El-Ghazali Talbi
language : en
Publisher: John Wiley & Sons
Release Date : 2007-12-04

Grid Computing For Bioinformatics And Computational Biology written by El-Ghazali Talbi and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-12-04 with Computers categories.

The only single, up-to-date source for Grid issues in bioinformatics and biology Bioinformatics is fast emerging as an important discipline for academic research and industrial applications, creating a need for the use of Grid computing techniques for large-scale distributed applications. This book successfully presents Grid algorithms and their real-world applications, provides details on modern and ongoing research, and explores software frameworks that integrate bioinformatics and computational biology. Additional coverage includes: * Bio-ontology and data mining * Data visualization * DNA assembly, clustering, and mapping * Molecular evolution and phylogeny * Gene expression and micro-arrays * Molecular modeling and simulation * Sequence search and alignment * Protein structure prediction * Grid infrastructure, middleware, and tools for bio data Grid Computing for Bioinformatics and Computational Biology is an indispensable resource for professionals in several research and development communities including bioinformatics, computational biology, Grid computing, data mining, and more. It also serves as an ideal textbook for undergraduate- and graduate-level courses in bioinformatics and Grid computing.

Encyclopedia Of Bioinformatics And Computational Biology

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Author :
language : en
Publisher: Elsevier
Release Date : 2018-08-21

Encyclopedia Of Bioinformatics And Computational Biology written by and has been published by Elsevier this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-08-21 with Medical categories.

Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics, Three Volume Set combines elements of computer science, information technology, mathematics, statistics and biotechnology, providing the methodology and in silico solutions to mine biological data and processes. The book covers Theory, Topics and Applications, with a special focus on Integrative –omics and Systems Biology. The theoretical, methodological underpinnings of BCB, including phylogeny are covered, as are more current areas of focus, such as translational bioinformatics, cheminformatics, and environmental informatics. Finally, Applications provide guidance for commonly asked questions. This major reference work spans basic and cutting-edge methodologies authored by leaders in the field, providing an invaluable resource for students, scientists, professionals in research institutes, and a broad swath of researchers in biotechnology and the biomedical and pharmaceutical industries. Brings together information from computer science, information technology, mathematics, statistics and biotechnology Written and reviewed by leading experts in the field, providing a unique and authoritative resource Focuses on the main theoretical and methodological concepts before expanding on specific topics and applications Includes interactive images, multimedia tools and crosslinking to further resources and databases

Encyclopedia Of Parallel Computing

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Author : David Padua
language : en
Publisher: Springer Science & Business Media
Release Date : 2011-09-08

Encyclopedia Of Parallel Computing written by David Padua and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-09-08 with Computers categories.

Containing over 300 entries in an A-Z format, the Encyclopedia of Parallel Computing provides easy, intuitive access to relevant information for professionals and researchers seeking access to any aspect within the broad field of parallel computing. Topics for this comprehensive reference were selected, written, and peer-reviewed by an international pool of distinguished researchers in the field. The Encyclopedia is broad in scope, covering machine organization, programming languages, algorithms, and applications. Within each area, concepts, designs, and specific implementations are presented. The highly-structured essays in this work comprise synonyms, a definition and discussion of the topic, bibliographies, and links to related literature. Extensive cross-references to other entries within the Encyclopedia support efficient, user-friendly searchers for immediate access to useful information. Key concepts presented in the Encyclopedia of Parallel Computing include; laws and metrics; specific numerical and non-numerical algorithms; asynchronous algorithms; libraries of subroutines; benchmark suites; applications; sequential consistency and cache coherency; machine classes such as clusters, shared-memory multiprocessors, special-purpose machines and dataflow machines; specific machines such as Cray supercomputers, IBM’s cell processor and Intel’s multicore machines; race detection and auto parallelization; parallel programming languages, synchronization primitives, collective operations, message passing libraries, checkpointing, and operating systems. Topics covered: Speedup, Efficiency, Isoefficiency, Redundancy, Amdahls law, Computer Architecture Concepts, Parallel Machine Designs, Benmarks, Parallel Programming concepts & design, Algorithms, Parallel applications. This authoritative reference will be published in two formats: print and online. The online edition features hyperlinks to cross-references and to additional significant research. Related Subjects: supercomputing, high-performance computing, distributed computing

Euro Par 2006 Workshops Parallel Processing

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Author : Wolfgang Lehner
language : en
Publisher: Springer
Release Date : 2007-06-27

Euro Par 2006 Workshops Parallel Processing written by Wolfgang Lehner and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-06-27 with Computers categories.

This book constitutes the thoroughly refereed joint post-proceedings of the three International Workshops on Grid Middleware, CoreGrid 2006, the UNICORE Summit 2006, and the Workshop on Petascale Computational Biology and Bioinformatics, held in Dresden, Germany, in August/September 2006, in conjunction with Euro-Par 2006, the 12th International Conference on Parallel Computing.

Parallel Computing Technologies

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Author : Victor Malyshkin
language : en
Publisher: Springer
Release Date : 2013-09-24

Parallel Computing Technologies written by Victor Malyshkin and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-09-24 with Computers categories.

This book constitutes the proceedings of the 12th International Conference on Parallel Computing Technologies, PaCT 2013, held in St. Petersburg, Russia, during September 30-October 4, 2013. The 41 full papers presented together with 2 invited papers were carefully reviewed and selected from 83 submissions. The papers are organized in topical sections on all technological aspects of the applications of parallel computer systems High level parallel programming languages and systems, methods and tools for parallel solution of large-scale problems, languages, environments and software tools supporting parallel processing, operating systems, scheduling, mapping, load balancing, general architectural concepts, cellular automata, performance measurement and analysis tools, teaching parallel processing, software for grid and cloud computing, scalable computing, fragmentation and aggregation of algorithms and programs as well as programs assembling and reuse.

Bioinformatics

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Author : Bertil Schmidt
language : en
Publisher: CRC Press
Release Date : 2010-07-15

Bioinformatics written by Bertil Schmidt and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-07-15 with Computers categories.

New sequencing technologies have broken many experimental barriers to genome scale sequencing, leading to the extraction of huge quantities of sequence data. This expansion of biological databases established the need for new ways to harness and apply the astounding amount of available genomic information and convert it into substantive biological

Bioinformatics And Biomedical Engineering

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Author : Francisco Ortuño
language : en
Publisher: Springer
Release Date : 2015-03-16

Bioinformatics And Biomedical Engineering written by Francisco Ortuño and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-03-16 with Computers categories.

The two volume set LNCS 9043 and 9044 constitutes the refereed proceedings of the Third International Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2015, held in Granada, Spain, in April 2015. The 135 papers presented were carefully reviewed and selected from 268 submissions. The scope of the conference spans the following areas: bioinformatics for healthcare and diseases, biomedical engineering, biomedical image analysis, biomedical signal analysis, computational genomics, computational proteomics, computational systems for modelling biological processes, e Health, next generation sequencing and sequence analysis, quantitative and systems pharmacology, Hidden Markov Model (HMM) for biological sequence modeling, advances in computational intelligence for bioinformatics and biomedicine, tools for next generation sequencing data analysis, dynamics networks in system medicine, interdisciplinary puzzles of measurements in biological systems, biological networks, high performance computing in bioinformatics, computational biology and computational chemistry, advances in drug discovery and ambient intelligence for bio emotional computing.

Deep Learning And Parallel Computing Environment For Bioengineering Systems

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Author : Arun Kumar Sangaiah
language : en
Publisher: Academic Press
Release Date : 2019-07-26

Deep Learning And Parallel Computing Environment For Bioengineering Systems written by Arun Kumar Sangaiah and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-07-26 with Technology & Engineering categories.

Deep Learning and Parallel Computing Environment for Bioengineering Systems delivers a significant forum for the technical advancement of deep learning in parallel computing environment across bio-engineering diversified domains and its applications. Pursuing an interdisciplinary approach, it focuses on methods used to identify and acquire valid, potentially useful knowledge sources. Managing the gathered knowledge and applying it to multiple domains including health care, social networks, mining, recommendation systems, image processing, pattern recognition and predictions using deep learning paradigms is the major strength of this book. This book integrates the core ideas of deep learning and its applications in bio engineering application domains, to be accessible to all scholars and academicians. The proposed techniques and concepts in this book can be extended in future to accommodate changing business organizations' needs as well as practitioners' innovative ideas. - Presents novel, in-depth research contributions from a methodological/application perspective in understanding the fusion of deep machine learning paradigms and their capabilities in solving a diverse range of problems - Illustrates the state-of-the-art and recent developments in the new theories and applications of deep learning approaches applied to parallel computing environment in bioengineering systems - Provides concepts and technologies that are successfully used in the implementation of today's intelligent data-centric critical systems and multi-media Cloud-Big data