Perl For Bio Informatics I
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Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001
Beginning Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001 with Computers categories.
This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with the skills to tackle more advanced bioinformatics programming.
Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001-10-22
Beginning Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-10-22 with Computers categories.
With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output
Perl For Bio Informatics I
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Author : David Scott
language : en
Publisher: Lulu.com
Release Date : 2013-01-07
Perl For Bio Informatics I written by David Scott and has been published by Lulu.com this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-01-07 with Computers categories.
Go from scripts to functions to programs. Learn bio programming with the Perl development paradigm. Learn to write tested, documented, object oriented code the Perl way.
Developing Bioinformatics Computer Skills
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Author : Cynthia Gibas
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001
Developing Bioinformatics Computer Skills written by Cynthia Gibas and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001 with Computers categories.
This practical, hands-on guide shows how to develop a structured approach to biological data and the tools needed to analyze it. It's aimed at scientists and students learning computational approaches to biological data, as well as experienced biology researchers starting to use computers to handle data.
Combinatorial Pattern Matching Algorithms In Computational Biology Using Perl And R
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Author : Gabriel Valiente
language : en
Publisher: CRC Press
Release Date : 2009-04-08
Combinatorial Pattern Matching Algorithms In Computational Biology Using Perl And R written by Gabriel Valiente and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-04-08 with Computers categories.
Emphasizing the search for patterns within and between biological sequences, trees, and graphs, Combinatorial Pattern Matching Algorithms in Computational Biology Using Perl and R shows how combinatorial pattern matching algorithms can solve computational biology problems that arise in the analysis of genomic, transcriptomic, proteomic, metabolomic
Python For Bioinformatics
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Author : Sebastian Bassi
language : en
Publisher: CRC Press
Release Date : 2017-08-07
Python For Bioinformatics written by Sebastian Bassi and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-08-07 with Mathematics categories.
In today's data driven biology, programming knowledge is essential in turning ideas into testable hypothesis. Based on the author’s extensive experience, Python for Bioinformatics, Second Edition helps biologists get to grips with the basics of software development. Requiring no prior knowledge of programming-related concepts, the book focuses on the easy-to-use, yet powerful, Python computer language. This new edition is updated throughout to Python 3 and is designed not just to help scientists master the basics, but to do more in less time and in a reproducible way. New developments added in this edition include NoSQL databases, the Anaconda Python distribution, graphical libraries like Bokeh, and the use of Github for collaborative development.
Bioinformatics Data Skills
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Author : Vince Buffalo
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2015-07
Bioinformatics Data Skills written by Vince Buffalo and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-07 with Computers categories.
Learn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, youâ??ll learn how to use freely available open source tools to extract meaning from large complex biological data sets. At no other point in human history has our ability to understand lifeâ??s complexities been so dependent on our skills to work with and analyze data. This intermediate-level book teaches the general computational and data skills you need to analyze biological data. If you have experience with a scripting language like Python, youâ??re ready to get started. Go from handling small problems with messy scripts to tackling large problems with clever methods and tools Process bioinformatics data with powerful Unix pipelines and data tools Learn how to use exploratory data analysis techniques in the R language Use efficient methods to work with genomic range data and range operations Work with common genomics data file formats like FASTA, FASTQ, SAM, and BAM Manage your bioinformatics project with the Git version control system Tackle tedious data processing tasks with with Bash scripts and Makefiles
Bioinformatics
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Author : Andreas D. Baxevanis
language : en
Publisher: Wiley-Interscience
Release Date : 2001-05-04
Bioinformatics written by Andreas D. Baxevanis and has been published by Wiley-Interscience this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-05-04 with Computers categories.
This book spans the broad spectrum of topics in bioinformatics, from Internet use to predictive algorithms, without requiring advanced mathematics or computer science literacy. It covers important concepts and state-of-the-art tools, and includes a glossary, appendices, and end-of-chapter bibliographies.
Xml For Bioinformatics
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Author : Ethan Cerami
language : en
Publisher: Springer
Release Date : 2010-12-24
Xml For Bioinformatics written by Ethan Cerami and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-12-24 with Computers categories.
Introduction The goal of this book is to introduce XML to a bioinformatics audience. It does so by introducing the fundamentals of XML, Document Type De?nitions (DTDs), XML Namespaces, XML Schema, and XML parsing, and illustrating these concepts with speci?c bioinformatics case studies. The book does not assume any previous knowledge of XML and is geared toward those who want a solid introduction to fundamental XML concepts. The book is divided into nine chapters: Chapter 1: Introduction to XML for Bioinformatics. This chapter provides an introduction to XML and describes the use of XML in biological data exchange. A bird’s-eye view of our ?rst case study, the Distributed Annotation System (DAS), is provided and we examine a sample DAS XML document. The chapter concludes with a discussion of the pros and cons of using XML in bioinformatic applications. Chapter 2: Fundamentals of XML and BSML. This chapter introduces the fundamental concepts of XML and the Bioinformatic Sequence Markup Language (BSML). We explore the origins of XML, de?ne basic rules for XML document structure, and introduce XML Na- spaces. We also explore several sample BSML documents and visualize these documents in the TM Rescentris Genomic Workspace Viewer.
School Of Bio And Chemical Engineering Perl For Bioinformatics
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Author : Mr. Rohit Manglik
language : en
Publisher: EduGorilla Publication
Release Date : 2024-04-17
School Of Bio And Chemical Engineering Perl For Bioinformatics written by Mr. Rohit Manglik and has been published by EduGorilla Publication this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-04-17 with Science categories.
EduGorilla Publication is a trusted name in the education sector, committed to empowering learners with high-quality study materials and resources. Specializing in competitive exams and academic support, EduGorilla provides comprehensive and well-structured content tailored to meet the needs of students across various streams and levels.