Rasttk
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Rasttk
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Author :
language : en
Publisher:
Release Date : 2015
Rasttk written by and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015 with categories.
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline for identifying genomic features (i.e., protein-encoding genes and RNA) and annotating their functions. Recently, in order to make RAST a more useful research tool and to keep pace with advancements in bioinformatics, it has become desirable to build a version of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables researchers to build custom annotation pipelines. RASTtk offers a choice of software for identifying and annotating genomic features as well as the ability to add custom features to an annotation job. RASTtk also accommodates the batch submission of genomes and the ability to customize annotation protocols for batch submissions. This is the first major software restructuring of RAST since its inception.
Bioinformatics And Human Genomics Research
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Author : Diego A. Forero
language : en
Publisher: CRC Press
Release Date : 2021-12-22
Bioinformatics And Human Genomics Research written by Diego A. Forero and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-12-22 with Science categories.
Advances in high-throughput biological methods have led to the publication of a large number of genome-wide studies in human and animal models. In this context, recent tools from bioinformatics and computational biology have been fundamental for the analysis of these genomic studies. The book Bioinformatics and Human Genomics Research provides updated and comprehensive information about multiple approaches of the application of bioinformatic tools to research in human genomics. It covers strategies analysis of genome-wide association studies, genome-wide expression studies and genome-wide DNA methylation, among other topics. It provides interesting strategies for data mining in human genomics, network analysis, prediction of binding sites for miRNAs and transcription factors, among other themes. Experts from all around the world in bioinformatics and human genomics have contributed chapters in this book. Readers will find this book as quite useful for their in silico explorations, which would contribute to a better and deeper understanding of multiple biological processes and of pathophysiology of many human diseases.
Biology Of Mycobacterial Lipids
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Author : Zeeshan Fatima
language : en
Publisher: Academic Press
Release Date : 2022-06-03
Biology Of Mycobacterial Lipids written by Zeeshan Fatima and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-06-03 with Science categories.
Biology of Mycobacterial Lipids covers various topics pertaining to the advancements and current research in the field of mycobacterial lipids, and on the significant progress in lipidomics, in recent times. The chapters present comprehensive, yet systematic cutting-edge research, comprising mycobacterial lipid terminologies, classifications, biosynthetic pathways, tools and techniques, and functional burgeoning. This unique reference book has contributions from pioneer researchers, experts, and eminent veterans from around the globe. It covers ground-breaking work that will bridge the gap between understanding biochemical patterns related to virulence, pathogenesis, and resistance and elucidating new targets for drug design, identifying biomarkers for predicting risk, early diagnosis, and therapeutic outcome. Covers major biochemical aspects of mycobacterial lipids, nomenclature, structure and classification, and metabolic pathways Focuses on recent trends and state-of-the-art technology, used in mycobacterial lipids study Brings together the functional aspects of mycobacterial lipidome, involvement of lipids in cellular network and signaling, its involvement in virulence and resistance, and host factor manipulations Highlights the discovery of lipid biomarkers, for diagnostic and therapeutic interventions, using mycobacterial lipidomic studies Presents lipids at the interface of various other biomolecules with integrative omics aspects
Bacterial Genetics And Genomics
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Author : Lori Snyder
language : en
Publisher: Taylor & Francis
Release Date : 2024-04-29
Bacterial Genetics And Genomics written by Lori Snyder and has been published by Taylor & Francis this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-04-29 with Science categories.
Understanding of bacterial genetics and genomics is fundamental to understanding bacteria and higher organisms, as well. Novel insights in the fields of genetics and genomics are challenging the once clear borders between the characteristics of bacteria and other life. Biological knowledge of the bacterial world is being viewed under a new light with input from genetic and genomics. Replication of bacterial circular and linear chromosomes, coupled (and uncoupled) transcription and translation, multiprotein systems that enhance survival, wide varieties of ways to control gene and protein expression, and a range of other features all influence the diversity of the microbial world. This text acknowledges that readers have varied knowledge of genetics and microbiology. Therefore, information is presented progressively, to enable all readers to understand the more advanced material in the book. This second edition of Bacterial Genetics and Genomics updates the information from the first edition with advances made over the past five years. This includes descriptions for 10 types of secretion systems, bacteria that can be seen with the naked eye, and differences between coupled transcription-translation and the uncoupled runaway transcription in bacteria. Topic updates include advances in bacteriophage therapy, biotechnology, and understanding bacterial evolution. Key Features Genetics, genomics, and bioinformatics integrated in one place Over 400 full-colour illustrations explain concepts and mechanisms throughout and are available to instructors for download A section dedicated to the application of genetics and genomics techniques, including a chapter devoted to laboratory techniques, which includes useful tips and recommendations for protocols, in addition to troubleshooting and alternative strategies Bulleted key points summarize each chapter Extensive self-study questions related to the chapter text and several discussion topics for study groups to explore further This book is extended and enhanced through a range of digital resources that include: Interactive online quizzes for each chapter Flashcards that allow the reader to test their understanding of key terms from the book Useful links for online resources associated with Chapters 16 and 17
Bacterial Genetics And Genomics
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Author : Lori A.S. Snyder
language : en
Publisher: Garland Science
Release Date : 2020-03-25
Bacterial Genetics And Genomics written by Lori A.S. Snyder and has been published by Garland Science this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-03-25 with Science categories.
Our understanding of bacterial genetics has progressed as the genomics field has advanced. Genetics and genomics complement and influence each other; they are inseparable. Under the novel insights from genetics and genomics, once-believed borders in biology start to fade: biological knowledge of the bacterial world is being viewed under a new light and concepts are being redefined. Species are difficult to delimit and relationships within and between groups of bacteria – the whole concept of a tree of life – is hotly debated when dealing with bacteria. The DNA within bacterial cells contains a variety of features and signals that influence the diversity of the microbial world. This text assumes readers have some knowledge of genetics and microbiology but acknowledges that it can be varied. Therefore, the book includes all of the information that readers need to know in order to understand the more advanced material in the book.
Bioinformatik
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Author : Rainer Merkl
language : de
Publisher: John Wiley & Sons
Release Date : 2022-08-15
Bioinformatik written by Rainer Merkl and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-08-15 with Medical categories.
Bioinformatik Der Marktführer bei den Bioinformatiklehrbüchern in neuer Auflage und mit dem neuen Thema Molekulardynamik Bioinformatik ist eine Kerndisziplin in den modernen Biowssenschaften, von der Biotechnologie über die Biochemie und Molekularbiologie bis zur Molekulargenetik und Molekularmedizin. Sie ist eine essenzielle Grundlage für alle “omics”-Technologien, für die Strukturbiologie, die Systembiologie sowie die synthetische Biologie. Bioinformatik. Grundlagen, Algorithmen, Anwendungen bietet eine umfassende Einführung in die wichtigsten Methoden der Bioinformatik. Der Autor erklärt dabei sowohl die mathematischen und biologischen Grundlagen als auch die wichtigsten Software-Tools und deren Anwendungsbereiche. Schwerpunkte sind Methoden zum Sequenzvergleich, Verfahren zur Charakterisierung von Proteinfamilien, Algorithmen zur Vorhersage von Protein- und RNA-Strukturen, Methoden des maschinellen Lernens und das Proteindesign. Für die 4. Auflage wurde der Text durchgehend aktualisiert und um ein Kapitel zur Molekulardynamik erweitert. Neu aufgenommene Exkurse zu Meilensteinen der Bioinformatik und aktuellen Anwendungsgebieten lockern den Text auf. Auf der ebenfalls komplett überarbeiteten Begleit-Webseite werden interaktive Lernmodule bereitgestellt, einschließlich mehr als 120 Übungsaufgaben, zum Teil mit Lösungen. Eine perfekte Einführung für alle Studenten der Lebenswissenschaften oder Informatik, die einen Einblick in die gängigen Methoden der Bioinformatik benötigen, sowie ein wertvoller Begleiter für alle, die bereits bioinformatische Werkzeuge nutzen und die zugrundeliegenden Konzepte verstehen möchten.
Biohydrometallurgical Processes
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Author : Satarupa Dey
language : en
Publisher: CRC Press
Release Date : 2023-12-06
Biohydrometallurgical Processes written by Satarupa Dey and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-12-06 with Technology & Engineering categories.
Extensive industrialization has led to an increased release of toxic metals into the soil and air. Industrial waste can include mine overburden, bauxite residue, and E waste, and these can serve as a source of valuable recoverable metals. There are relatively simple methods to recycle these wastes, but they require additional chemicals, are expensive, and generate secondary waste that causes environmental pollution. Biohydrometallurgical processing is a cost-effective and ecofriendly alternative where biological processes help conserve dwindling ore resources and extract metals in a nonpolluting way. Microbes can be used in metal extraction from primary ores, waste minerals, and industrial and mining wastes. Biohydrometallurgical Processes: Metal Recovery and Remediation serves as a useful guide for microbiologists, biotechnologists, and various industrialists dealing with mining, metallurgy, chemical engineering, and environmental sciences. Features: Examines advances in biohydrometallurgy, biomineralization, and bioleaching techniques Discusses the importance of bacteria in biohydrometallurgical processes and microbial interventions for waste cleanup and upgradation of minerals Presents the latest techniques for biosynthesis related to different metals, along with recent developments in alternative procedures using extremophiles and leaching bacteria
The Molecular Mechanisms Of Antibiotic Resistance In Aquatic Pathogens
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Author : Xiangmin Lin
language : en
Publisher: Frontiers Media SA
Release Date : 2020-12-09
The Molecular Mechanisms Of Antibiotic Resistance In Aquatic Pathogens written by Xiangmin Lin and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-12-09 with Science categories.
This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.
Scales And Modes Around The World
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Author : Rechberger, Herman
language : en
Publisher: Fennica Gehrman Ltd.
Release Date : 2018-02-01
Scales And Modes Around The World written by Rechberger, Herman and has been published by Fennica Gehrman Ltd. this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-02-01 with Music categories.
Scales and modes are the building blocks of music. This is true for all the many music cultures of the world. This compendium covers the different scales as they are used in the Western tradition, including ie. the Greek, Byzantine, Octamodes, Takemitsu modes, Heptamodes, Octamodes, as well as modes in religious music and jazz, and synthetic scales created by some the most famous composers of the western music. Non-western scales cover Arabic, Persian, Turkish, Azerbaijani, Indian Ragas, Bali, Thai, Laos, Burma and the scales of some ethnic minorities in South East Asia. The wealth of information in this book is organized geographically, introducing and explaining over 500 different scales and modes. The use of the scales, the interval relations and structures are explained in illustrations. This compendium is an invaluable resource to everyone interested in the theory of the world’s music cultures, be it an individual musician, composer, arranger, musicologist, theorist, or jazz musician finding inspiration for the solos. See the sample pages for more information.
6th International Conference On Advances In Biosciences And Biotechnology 2023 Icabb 2023
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Author : Pammi Gauba
language : en
Publisher: I K International Pvt Ltd
Release Date : 2023-01-18
6th International Conference On Advances In Biosciences And Biotechnology 2023 Icabb 2023 written by Pammi Gauba and has been published by I K International Pvt Ltd this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-01-18 with Science categories.
6th International Conference on Advances in Biosciences and Biotechnology-2023(ICABB-2023)