Reproducibility
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Reproducibility And Replicability In Science
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Author : National Academies of Sciences, Engineering, and Medicine
language : en
Publisher: National Academies Press
Release Date : 2019-10-20
Reproducibility And Replicability In Science written by National Academies of Sciences, Engineering, and Medicine and has been published by National Academies Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-10-20 with Science categories.
One of the pathways by which the scientific community confirms the validity of a new scientific discovery is by repeating the research that produced it. When a scientific effort fails to independently confirm the computations or results of a previous study, some fear that it may be a symptom of a lack of rigor in science, while others argue that such an observed inconsistency can be an important precursor to new discovery. Concerns about reproducibility and replicability have been expressed in both scientific and popular media. As these concerns came to light, Congress requested that the National Academies of Sciences, Engineering, and Medicine conduct a study to assess the extent of issues related to reproducibility and replicability and to offer recommendations for improving rigor and transparency in scientific research. Reproducibility and Replicability in Science defines reproducibility and replicability and examines the factors that may lead to non-reproducibility and non-replicability in research. Unlike the typical expectation of reproducibility between two computations, expectations about replicability are more nuanced, and in some cases a lack of replicability can aid the process of scientific discovery. This report provides recommendations to researchers, academic institutions, journals, and funders on steps they can take to improve reproducibility and replicability in science.
Reproducibility
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Author : Harald Atmanspacher
language : en
Publisher: John Wiley & Sons
Release Date : 2016-07-05
Reproducibility written by Harald Atmanspacher and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-07-05 with Mathematics categories.
2017 PROSE Award Honorable Mention The PROSE Awards draw attention to pioneering works of research and for contributions to the conception, production, and design of landmark works in their fields. Featuring peer-reviewed contributions from noted experts in their fields of research, Reproducibility: Principles, Problems, Practices, and Prospects presents state-of-the-art approaches to reproducibility, the gold standard of sound science, from multi- and interdisciplinary perspectives. Including comprehensive coverage for implementing and reflecting the norm of reproducibility in various pertinent fields of research, the book focuses on how the reproducibility of results is applied, how it may be limited, and how such limitations can be understood or even controlled in the natural sciences, computational sciences, life sciences, social sciences, and studies of science and technology. The book presents many chapters devoted to a variety of methods and techniques, as well as their epistemic and ontological underpinnings, which have been developed to safeguard reproducible research and curtail deficits and failures. The book also investigates the political, historical, and social practices that underlie reproducible research in contemporary science studies, including the difficulties of good scientific practice and the ethos of reproducibility in modern innovation societies. Reproducibility: Principles, Problems, Practices, and Prospects is a guide for researchers who are interested in the general and overarching questions behind the concept of reproducibility; for active scientists who are confronted with practical reproducibility problems in their everyday work; and for economic stakeholders and political decision makers who need to better understand the challenges of reproducibility. In addition, the book is a useful in-depth primer for undergraduate and graduate-level courses in scientific methodology and basic issues in the philosophy and sociology of science from a modern perspective. “A comprehensive, insightful treatment of the reproducibility challenges facing science today and of ways in which the scientific community can address them.” Kathleen Hall Jamieson, Elizabeth Ware Packard Professor of Communication, University of Pennsylvania “How can we make sure that reproducible research remains a key imperative of scientific communication under increasing commercialization, media attention, and publication pressure? This handbook offers the first interdisciplinary and fundamental treatment of this important question.”Torsten Hothorn, Professor of Biostatistics, University of Zurich Harald Atmanspacher, PhD, is Associate Fellow and staff member at Collegium Helveticum, ETH and University Zurich and is also President of the Society for Mind-Matter Research. He has pioneered advances in complex dynamical systems research and in a number of topics concerned with the relation between the mental and physical. Sabine Maasen, PhD, is Professor for Sociology of Science and Director of the Munich Center for Technology in Society (TU Munich) and Associate Fellow at Collegium Helveticum (ETH and University Zurich). Her research focuses on the interface of science, technology, and society, notably with respect to neuroscience and its applications.
Reproducibility And Rigour In Computational Neuroscience
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Author : Sharon Crook
language : en
Publisher: Frontiers Media SA
Release Date : 2020-07-09
Reproducibility And Rigour In Computational Neuroscience written by Sharon Crook and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-07-09 with categories.
The Practice Of Reproducible Research
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Author : Justin Kitzes
language : en
Publisher: Univ of California Press
Release Date : 2018
The Practice Of Reproducible Research written by Justin Kitzes and has been published by Univ of California Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018 with Computers categories.
The Practice of Reproducible Research presents concrete examples of how researchers in the data-intensive sciences are working to improve the reproducibility of their research projects. In each of the thirty-one case studies in this volume, the author or team describes the workflow that they used to complete a real-world research project. Authors highlight how they utilized particular tools, ideas, and practices to support reproducibility, emphasizing the very practical how, rather than the why or what, of conducting reproducible research. Part 1 provides an accessible introduction to reproducible research, a basic reproducible research project template, and a synthesis of lessons learned from across the thirty-one case studies. Parts 2 and 3 focus on the case studies themselves. The Practice of Reproducible Research is an invaluable resource for students and researchers who wish to better understand the practice of data-intensive sciences and learn how to make their own research more reproducible.
Reproducible Data Science With Pachyderm
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Author : Svetlana Karslioglu
language : en
Publisher: Packt Publishing Ltd
Release Date : 2022-03-18
Reproducible Data Science With Pachyderm written by Svetlana Karslioglu and has been published by Packt Publishing Ltd this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-03-18 with Computers categories.
Create scalable and reliable data pipelines easily with Pachyderm Key FeaturesLearn how to build an enterprise-level reproducible data science platform with PachydermDeploy Pachyderm on cloud platforms such as AWS EKS, Google Kubernetes Engine, and Microsoft Azure Kubernetes ServiceIntegrate Pachyderm with other data science tools, such as Pachyderm NotebooksBook Description Pachyderm is an open source project that enables data scientists to run reproducible data pipelines and scale them to an enterprise level. This book will teach you how to implement Pachyderm to create collaborative data science workflows and reproduce your ML experiments at scale. You'll begin your journey by exploring the importance of data reproducibility and comparing different data science platforms. Next, you'll explore how Pachyderm fits into the picture and its significance, followed by learning how to install Pachyderm locally on your computer or a cloud platform of your choice. You'll then discover the architectural components and Pachyderm's main pipeline principles and concepts. The book demonstrates how to use Pachyderm components to create your first data pipeline and advances to cover common operations involving data, such as uploading data to and from Pachyderm to create more complex pipelines. Based on what you've learned, you'll develop an end-to-end ML workflow, before trying out the hyperparameter tuning technique and the different supported Pachyderm language clients. Finally, you'll learn how to use a SaaS version of Pachyderm with Pachyderm Notebooks. By the end of this book, you will learn all aspects of running your data pipelines in Pachyderm and manage them on a day-to-day basis. What you will learnUnderstand the importance of reproducible data science for enterpriseExplore the basics of Pachyderm, such as commits and branchesUpload data to and from PachydermImplement common pipeline operations in PachydermCreate a real-life example of hyperparameter tuning in PachydermCombine Pachyderm with Pachyderm language clients in Python and GoWho this book is for This book is for new as well as experienced data scientists and machine learning engineers who want to build scalable infrastructures for their data science projects. Basic knowledge of Python programming and Kubernetes will be beneficial. Familiarity with Golang will be helpful.
Implementing Reproducible Research
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Author : Victoria Stodden
language : en
Publisher: CRC Press
Release Date : 2018-12-14
Implementing Reproducible Research written by Victoria Stodden and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-12-14 with Mathematics categories.
In computational science, reproducibility requires that researchers make code and data available to others so that the data can be analyzed in a similar manner as in the original publication. Code must be available to be distributed, data must be accessible in a readable format, and a platform must be available for widely distributing the data and code. In addition, both data and code need to be licensed permissively enough so that others can reproduce the work without a substantial legal burden. Implementing Reproducible Research covers many of the elements necessary for conducting and distributing reproducible research. It explains how to accurately reproduce a scientific result. Divided into three parts, the book discusses the tools, practices, and dissemination platforms for ensuring reproducibility in computational science. It describes: Computational tools, such as Sweave, knitr, VisTrails, Sumatra, CDE, and the Declaratron system Open source practices, good programming practices, trends in open science, and the role of cloud computing in reproducible research Software and methodological platforms, including open source software packages, RunMyCode platform, and open access journals Each part presents contributions from leaders who have developed software and other products that have advanced the field. Supplementary material is available at www.ImplementingRR.org.
Principles Of Nutritional Assessment
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Author : Rosalind S. Gibson
language : en
Publisher:
Release Date : 2005
Principles Of Nutritional Assessment written by Rosalind S. Gibson and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2005 with Health & Fitness categories.
With over 200 newly drafted figures & many new tables drawn from the wealth of data published over the last 15 years, this new edition has been thoroughly revised.
Rapid Reproducible And Robust Environmental Modeling For Decision Support Worked Examples And Open Source Software Tools
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Author : Jeremy White
language : en
Publisher: Frontiers Media SA
Release Date : 2023-10-11
Rapid Reproducible And Robust Environmental Modeling For Decision Support Worked Examples And Open Source Software Tools written by Jeremy White and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-10-11 with Science categories.
Transparent And Reproducible Social Science Research
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Author : Garret Christensen
language : en
Publisher: University of California Press
Release Date : 2019-07-23
Transparent And Reproducible Social Science Research written by Garret Christensen and has been published by University of California Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-07-23 with Social Science categories.
Recently, social science has had numerous episodes of influential research that was found invalid when placed under rigorous scrutiny. The growing sense that many published results are potentially erroneous has made those conducting social science research more determined to ensure the underlying research is sound. Transparent and Reproducible Social Science Research is the first book to summarize and synthesize new approaches to combat false positives and non-reproducible findings in social science research, document the underlying problems in research practices, and teach a new generation of students and scholars how to overcome them. Understanding that social science research has real consequences for individuals when used by professionals in public policy, health, law enforcement, and other fields, the book crystallizes new insights, practices, and methods that help ensure greater research transparency, openness, and reproducibility. Readers are guided through well-known problems and are encouraged to work through new solutions and practices to improve the openness of their research. Created with both experienced and novice researchers in mind, Transparent and Reproducible Social Science Research serves as an indispensable resource for the production of high quality social science research.
Reproducible Research In Pattern Recognition
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Author : Bertrand Kerautret
language : en
Publisher: Springer Nature
Release Date : 2023-08-19
Reproducible Research In Pattern Recognition written by Bertrand Kerautret and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-08-19 with Computers categories.
This book constitutes the thoroughly refereed post-workshop proceedings of the 4th International Workshop on Reproducible Research in Pattern Recognition, RRPR 2022, held in Montreal, Canada, in August 2022. The 5 revised full papers presented together with 4 short papers, were carefully reviewed and selected from 9 submissions. The papers were organized into three main categories