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The Application Of Gene Expression Profiling To Clinical Breast Cancer Research


The Application Of Gene Expression Profiling To Clinical Breast Cancer Research
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The Application Of Gene Expression Profiling To Clinical Breast Cancer Research


The Application Of Gene Expression Profiling To Clinical Breast Cancer Research
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Author : Sherene Loi
language : en
Publisher: LAP Lambert Academic Publishing
Release Date : 2009

The Application Of Gene Expression Profiling To Clinical Breast Cancer Research written by Sherene Loi and has been published by LAP Lambert Academic Publishing this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with categories.


The book has three main results parts. Chapter 3 illustrates the first independent validation study of a 70-gene signature developed from gene expression profiling for use in breast cancer prognosis and demonstration of its ability to add independent prognostic information to the clinical prognostic factors currently used. The successful validation of this study preceded the design and implementation of a world-wide randomized clinical trial evaluating the gene signature's clinical utility. This trial has commenced and is currently recruiting in Europe. Chapter 4 describes the finding that proliferation-related genes can predict clinical outcome consistently in breast cancer and many gene signatures developed for predicting breast cancer prognosis derive a significant proportion of their prognostic power from these genes. Finally, chapter 5 describes the use of proliferation-related genes to define two distinct prognostic molecular subgroups within estrogen receptor positive breast cancers.



The Application Of Gene Expression Profiling To Clinical Breast Cancer Research


The Application Of Gene Expression Profiling To Clinical Breast Cancer Research
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Author : Sherene Loi
language : en
Publisher:
Release Date : 2007

The Application Of Gene Expression Profiling To Clinical Breast Cancer Research written by Sherene Loi and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007 with Breast categories.




Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes


Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes
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Author : Luigi Marchionni
language : en
Publisher: DIANE Publishing
Release Date : 2009-05

Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes written by Luigi Marchionni and has been published by DIANE Publishing this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-05 with Medical categories.


Assesses the evidence that three marketed gene expression-based assays improve prognostic accuracy, treatment choice, and health outcomes in women diagnosed with early stage breast cancer. Three gene expression assays were evaluated; Oncotype DX¿, MammaPrint® and the Breast Cancer Profiling (BCP or H/I ratio) test, and for gene expression signatures underlying the assays. They sought evidence on: analytic performance of tests; clinical validity; clinical utility; harms; and impact on clinical decision making and health care costs. Conclusions: Oncotype DX is furthest along the validation pathway, with retrospective evidence that it predicts distant spread and chemotherapy benefit to a clinically relevant extent over standard predictors. Illus.



Expression Profiling Of Human Tumors


Expression Profiling Of Human Tumors
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Author : Marc Ladanyi
language : en
Publisher: Springer Science & Business Media
Release Date : 2003-05-01

Expression Profiling Of Human Tumors written by Marc Ladanyi and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-05-01 with Medical categories.


A comprehensive review of the use of global gene expression profiling to understand human tumors. The authors focus on the analysis of human tissue samples for a variety of cancers, including breast, colorectal, lung, renal, ovarian, bone, and brain tumors, among others. A primer on the technology and its novel analytical methods. Contains over 40 color images. Explains both the theory and practice of comprehensive gene expression profiling. Timely and topical, Expression Profiling of Human Tumors: Diagnostic and Research Applications offers every oncologist, pathologists, and cancer surgeons an essential introduction to the most promising new high-throughput investigative approaches in molecular biology-technology that is already dramatically reshaping the future of cancer research, diagnostic pathology, and clinical oncology.



Gene Expression Profiling Of The Breast Tumour Microenvironment


Gene Expression Profiling Of The Breast Tumour Microenvironment
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Author : Grzegorz Finak
language : en
Publisher:
Release Date : 2008

Gene Expression Profiling Of The Breast Tumour Microenvironment written by Grzegorz Finak and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with categories.


"Breast cancer is a very heterogeneous disease. This heterogeneity can be observed at many levels, including gene expression, chromosomal aberrations, and disease pathology. A clear understanding of these differences is important since they impact upon treatment efficacy and clinical outcome. Recent studies have demonstrated that the tumour microenvironment also plays a critical role in cancer initiation and progression. Genomic technologies have been used to gain a better understanding of the impact of gene expression heterogeneity on breast cancer, and have identified gene expression signatures associated with clinical outcome, histopathological breast cancer subtypes, and a variety of cancer-related pathways and processes. However, little work has been done in this context to examine the role of the tumour microenvironment in determining breast cancer outcome, or in defining breast cancer heterogeneity. Additionally, little is known about gene expression in histologically normal tissue adjacent to breast tumour, if this is influenced by the tumour, and how this compares with non-tumour-bearing breast tissue. By applying laser--capture microdissection and gene expression profiling to clinical breast cancer specimens the research presented in this thesis addresses these questions. We have generated gene expression profiles of morphologically normal epithelial and stromal tissue, isolated using laser capture microdissection, from patients with breast cancer or undergoing breast reduction mammoplasty. We determined that morphologically normal epithelium and stroma exhibited distinct expression profiles, but molecular signatures that distinguished breast reduction tissue from tumour-adjacent normal tissue were absent. Stroma isolated from morphologically normal ducts adjacent to tumour tissue contained two distinct expression profiles that correlated with stromal cellularity, and shared similarities with soft tissue tumors with favourable outcome. Adjacent normal epithelium and stroma from breast cancer patients showed no significant association between expression profiles and standard clinical characteristics, but did cluster ER/PR/HER2-negative breast cancers with basal-like subtype expression profiles with poor prognosis. Our data reveal that morphologically normal tissue adjacent to breast carcinomas has not undergone significant gene expression changes when compared to breast reduction tissue, and provide an important gene expression data set for comparative studies of tumour expression profiles. We compared gene expression profiles of tumour stroma from primary breast tumors and derived signatures strongly associated with clinical outcome. We present a new stroma-derived prognostic predictor (SDPP) that stratifies disease outcome independently of standard clinical prognostic factors and published expression-based predictors. The SDPP predicts outcome in several published whole tumour--derived expression data sets, identifies poor-outcome individuals from multiple clinical subtypes, including lymph node--negative tumors, and shows increased accuracy with respect to previously published predictors, especially for HER2-positive tumors. Prognostic power increases substantially when the predictor is combined with existing outcome predictors. Genes represented in the SDPP reveal the strong prognostic capacity of differential immune responses as well as angiogenic and hypoxic responses, highlighting the importance of stromal biology in tumour progression. We show that gene expression in the breast tumour microenvironment is highly heterogeneous, identifying at least six different classes of tumour stroma with distinct expression patterns and distinct biological processes. Two of these classes recapitulate the processes identified in the stroma-derived prognostic predictor, while the others are new classes of stroma associated with distinct clinical outcomes. One of these is associated with matrix remodelling and is strongly associated with the basal molecular subtype of breast cancer. The remainder are independent of the previously published molecular subtypes of breast cancer. Additionally, based on independent data from over 800 tumors, the combinations of stroma classes and breast cancer subtypes identify new subgroups of breast tumors that show better discrimination between good and poor outcome individuals than the molecular breast cancer subtypes or the stroma classes alone, suggesting a novel classification scheme for breast cancer. This research demonstrates an important role for the tumour microenvironment in defining breast cancer heterogeneity, with a consequent impact upon clinical outcome. Novel therapies could be targeted at the processes that define the stroma classes suggesting new avenues for individualized treatment."--



Gene Expression Profiling In Cancer


Gene Expression Profiling In Cancer
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Author : Dimitrios Vlachakis
language : en
Publisher: BoD – Books on Demand
Release Date : 2019-06-19

Gene Expression Profiling In Cancer written by Dimitrios Vlachakis and has been published by BoD – Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-06-19 with Medical categories.


The contribution of modern-day genetics in designing efficient gene expression profiles for cancer is immense. The progress of technology and science in recent years provides the opportunity for discovery and application of new techniques for treating various diseases that affect humanity. Methods for finding and analyzing the profile of gene expression of infected cells give scientists the ability to develop more targeted and effective treatments, especially for diseases such as cancer. The development of gene expression profiling is one of the most important achievements in cancer genetics in our time. It is essentially the driving force behind personalized and precision medicine. This book highlights recent developments, applications, and breakthroughs in the field of gene expression profiling in cancer.



Expression Profiling Of Human Tumors


Expression Profiling Of Human Tumors
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Author : Marc Ladanyi
language : en
Publisher: Humana
Release Date : 2003-05-01

Expression Profiling Of Human Tumors written by Marc Ladanyi and has been published by Humana this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-05-01 with Medical categories.


A comprehensive review of the use of global gene expression profiling to understand human tumors. The authors focus on the analysis of human tissue samples for a variety of cancers, including breast, colorectal, lung, renal, ovarian, bone, and brain tumors, among others. A primer on the technology and its novel analytical methods. Contains over 40 color images. Explains both the theory and practice of comprehensive gene expression profiling. Timely and topical, Expression Profiling of Human Tumors: Diagnostic and Research Applications offers every oncologist, pathologists, and cancer surgeons an essential introduction to the most promising new high-throughput investigative approaches in molecular biology-technology that is already dramatically reshaping the future of cancer research, diagnostic pathology, and clinical oncology.



Diagnostic Prognostic And Therapeutic Value Of Gene Signatures


Diagnostic Prognostic And Therapeutic Value Of Gene Signatures
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Author : Antonio Russo
language : en
Publisher: Springer Science & Business Media
Release Date : 2011-11-03

Diagnostic Prognostic And Therapeutic Value Of Gene Signatures written by Antonio Russo and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-11-03 with Medical categories.


Gene expression studies have revealed diagnostic profiles and upregulation of specific pathways in many solid tumors. The explosion of new information in gene expression profiling could potentially lead to the development of tailored treatments in many solid tumors. In addition many studies are ongoing to validate these signatures also in predicting response to hormonal, chemotherapeutic and targeted agents in breast cancer as well as in other tumors. Diagnostic, Prognostic and Therapeutic Value of Gene Signatures provides readers a useful and comprehensive resource about the range of applications of microarray technology in oncological diseases. Topics covered include gene signatures and soft tissue sarcomas, prognostic relevance of breast cancer signatures, gene expression profiling of colorectal cancer and liver metastasis, gene signatures in GISTs, CNVs and gene expression profiles in pancreatic cancer, and gene signatures in head/neck, lung and gastric tumors. Diagnostic, Prognostic and Therapeutic Value of Gene Signatures will be of great value to residents and fellows, physicians, pathologists and medical oncologists.



Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes


Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes
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Author : Luigi Marchionni (M.D.)
language : en
Publisher:
Release Date : 2008-01-01

Impact Of Gene Expression Profiling Tests On Breast Cancer Outcomes written by Luigi Marchionni (M.D.) and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008-01-01 with Breast categories.




Adjuvant Therapy For Breast Cancer


Adjuvant Therapy For Breast Cancer
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Author : Monica Castiglione
language : en
Publisher: Springer Science & Business Media
Release Date : 2009-07-11

Adjuvant Therapy For Breast Cancer written by Monica Castiglione and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-07-11 with Medical categories.


Adjuvant treatment is administered prior to or as follow up to surgical procedures for breast cancer. Proven success in using medical therapies allowing for breast conserving procedures or reducing risk of occurrence. Although there has been much progress towards a cure, including the introduction of new targeted therapies, metastasizing cancer remains highly incurable.