Transcriptome Analysis
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Transcriptome Analysis
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Author : Miroslav Blumenberg
language : en
Publisher: BoD – Books on Demand
Release Date : 2019-11-20
Transcriptome Analysis written by Miroslav Blumenberg and has been published by BoD – Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-11-20 with Medical categories.
Transcriptome analysis is the study of the transcriptome, of the complete set of RNA transcripts that are produced under specific circumstances, using high-throughput methods. Transcription profiling, which follows total changes in the behavior of a cell, is used throughout diverse areas of biomedical research, including diagnosis of disease, biomarker discovery, risk assessment of new drugs or environmental chemicals, etc. Transcriptome analysis is most commonly used to compare specific pairs of samples, for example, tumor tissue versus its healthy counterpart. In this volume, Dr. Pyo Hong discusses the role of long RNA sequences in transcriptome analysis, Dr. Shinichi describes the next-generation single-cell sequencing technology developed by his team, Dr. Prasanta presents transcriptome analysis applied to rice under various environmental factors, Dr. Xiangyuan addresses the reproductive systems of flowering plants and Dr. Sadovsky compares codon usage in conifers.
Transcriptome Analysis
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Author : Alessandro Cellerino
language : en
Publisher: Springer
Release Date : 2018-06-14
Transcriptome Analysis written by Alessandro Cellerino and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-06-14 with Mathematics categories.
The goal of this book is to be an accessible guide for undergraduate and graduate students to the new field of data-driven biology. Next-generation sequencing technologies have put genome-scale analysis of gene expression into the standard toolbox of experimental biologists. Yet, biological interpretation of high-dimensional data is made difficult by the lack of a common language between experimental and data scientists. By combining theory with practical examples of how specific tools were used to obtain novel insights in biology, particularly in the neurosciences, the book intends to teach students how to design, analyse, and extract biological knowledge from transcriptome sequencing experiments. Undergraduate and graduate students in biomedical and quantitative sciences will benefit from this text as well as academics untrained in the subject.
Transcriptome Profiling
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Author : Mohammad Ajmal Ali
language : en
Publisher: Elsevier
Release Date : 2022-10-07
Transcriptome Profiling written by Mohammad Ajmal Ali and has been published by Elsevier this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-10-07 with Science categories.
Transcriptome Profiling: Progress and Prospects assists readers in assessing and interpreting a large number of genes, up to and including an entire genome. It provides key insights into the latest tools and techniques used in transcriptomics and its relevant topics which can reveal a global snapshot of the complete RNA component of a cell at a given time. This snapshot, in turn, enables the distinction between different cell types, different disease states, and different time points during development. Transcriptome analysis has been a key area of biological inquiry for decades. The next-generation sequencing technologies have revolutionized transcriptomics by providing opportunities for multidimensional examinations of cellular transcriptomes in which high-throughput expression data are obtained at a single-base resolution. Transcriptome analysis has evolved from the detection of single RNA molecules to large-scale gene expression profiling and genome annotation initiatives. Written by a team of global experts, key topics in Transcriptome Profiling include transcriptome characterization, expression analysis of transcripts, transcriptome and gene regulation, transcriptome profiling and human health, medicinal plants transcriptomics, transcriptomics and genetic engineering, transcriptomics in agriculture, and phylotranscriptomics. - Presents recent development in the tools and techniques in transcriptomic characterization - Integrates expression analysis of transcripts and gene regulation - Includes the application of transcriptomics in human health, genetic engineering and agriculture
Omics In Horticultural Crops
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Author : Gyana Ranjan Rout
language : en
Publisher: Academic Press
Release Date : 2022-07-16
Omics In Horticultural Crops written by Gyana Ranjan Rout and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-07-16 with Science categories.
Omics in Horticulture Crops presents a comprehensive view of germplasm diversity, genetic evolution, genomics, proteomics and transcriptomics of fruit crops (temperate, tropical and subtropical fruits, fruit nuts, berries), vegetables, tuberous crops, ornamental and floricultural crops and medicinal aromatic plants. Information covering phenomics, genetic diversity, phylogenetic studies, genome sequencing, and genome barcoding through the utilization of molecular markers plays an imperative role in the characterization and effective utilization of diverse germplasm are included in the book. This is a valuable reference for researchers and academics seeking to improve cultivar productivity through enhanced genetic diversity while also retaining optimal traits and protecting the growing environment. - Highlights perspectives, progress and promises of -omics application - Provides a systematic overview of origin, progenitor and domestication process as well as genetic insights - Includes full range of horticultural crops
Systems Biology Bioinformatics And Livestock Science
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Author : Anupam Nath Jha
language : en
Publisher: Bentham Science Publishers
Release Date : 2023-11-08
Systems Biology Bioinformatics And Livestock Science written by Anupam Nath Jha and has been published by Bentham Science Publishers this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-11-08 with Science categories.
This book explores the intricate world of livestock sciences and production through the lens of systems biology. Offering a comprehensive exploration of both fundamental and advanced aspects, it unearths the potential of systems biology in the realm of livestock. The book presents 13 edited chapters on cutting-edge knowledge about systems biology and omics technology, showcasing genomics, transcriptomics, proteomics, metabolomics, and more. It illuminates the role of systems biology in livestock and disease management. Readers will learn about power of technologies that merge computational biology, nanobiotechnology, artificial intelligence, and single-cell sequencing. Each chapter is written by scientific experts and includes references for further reading. The book covers 4 key themes: Introduction to Systems Biology in Livestock Science: Uncover the foundation of integrating systems biology with omics data for animal scientists. Multi-scale Modeling Techniques: Explore how multi-scale modeling is shaping the future of system biology. Livestock Viral Diseases: Gain insights into how systems biology is revolutionizing our understanding of livestock viral diseases. Single Cell RNA-Sequencing: Understand the potential of this advanced technique in studying livestock animals at a cellular level. This book is a timely resource for students and researchers, offering a pathway to comprehend the crucial role systems biology plays in sustainable livestock production and management.
Biotechnology For Silkworm Crop Enhancement
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Author : Raviraj V Suresh
language : en
Publisher: Springer Nature
Release Date : 2024-10-15
Biotechnology For Silkworm Crop Enhancement written by Raviraj V Suresh and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-10-15 with Science categories.
The book introduces readers to the latest developments in biotechnological methods used for improving the cultivation of silkworms. The text focuses on implementing biotechnological approaches, ranging from basic to advanced techniques, on enhancing silk production, increasing abiotic stress resilience, improving disease tolerance, and developing resistance in silkworm crops. With the current climate crisis and growing demand for high-quality silk, biotechnological applications have become essential in addressing the urgent need to increase silk production. The field of sericulture has made significant breakthroughs, such as identifying DNA markers, linkage association, genome-wide association studies, generating mutants, and introducing transgenic silkworms. Developing silkworms with improved cocoon yield and disease resistance is crucial to boost silk production. The book covers fundamental principles and recent advancements and delves into various methodologies employed inseri-biotechnology for improving silkworm crops. These methodologies include next-generation sequencing for DNA sequencing, using molecular markers to enhance abiotic stress tolerance (specifically high temperature and humidity conditions), expression analysis, RNA interference, gene knockout approaches to bolster disease resistance, and transcriptomics to enhance economically significant parameters such as silk content. The book explains these topics in detail and includes contemporary research appraisals, extensive discussions, and an evaluation of the benefits and risks associated with the use of biotechnological tools. This book serves as an invaluable reference for researchers and academics in biotechnology, molecular biology, and sericulture while also serving as an informative starting point for budding researchers.
Ethnomedicinal Plants For Drug Discovery
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Author : Akhileshwar Kumar Srivastava
language : en
Publisher: Springer Nature
Release Date : 2024-09-01
Ethnomedicinal Plants For Drug Discovery written by Akhileshwar Kumar Srivastava and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-09-01 with Science categories.
This book explains the translational aspects of ethnomedicinal plants of different geographical regions including India by explaining the medicinal properties against several diseases, genomic evolution in changing environments, metabolic profiling for biomarker discovery, the role of non-coding RNA in the synthesis of secondary metabolites, genome-wide transcriptome profiling, application of pluripotent stem cells for drug discovery, the importance of high-throughput omics, and genome-editing techniques. In addition, some of the chapters have been designed to describe the role of artificial intelligence, plant database, and network-based drug discovery to explore the medicinal importance of compounds as well as challenges and opportunities in drug discovery from ethnomedicinal plants. The book serves as a great source of information for the students, researchers/scientists of diverse fields such as pharmacognosy, plant physiologists, biotechnologists, and pharmaceutical scientists etc., working in the areas of phytotherapy from ethnomedicinal plants.
The Carnation Genome
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Author : Takashi Onozaki
language : en
Publisher: Springer Nature
Release Date : 2020-12-17
The Carnation Genome written by Takashi Onozaki and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-12-17 with Science categories.
This book summarizes recent advances in carnation genome research for large-scale transcriptome analysis, the draft genome sequence, DNA markers and genome mapping, flower color, mutations, flower opening, vase life, interspecific hybridization, fragrance. The carnation is one of the most important ornamental flowers in the world, along with the chrysanthemum and the rose. The genus Dianthus is a member of the Caryophyllaceae and includes more than 300 species of annuals and evergreen perennials. Modern carnation cultivars are the product of highly complex hybridization, owing to their long history of breeding. The carnation genome was first sequenced in ornamentals by a Japanese research team in 2013. The carnation has been genetically improved over the years, and there are various types of flower colors, shapes, patterns, and sizes. In this book, the molecular mechanism of flower color development and the transposable elements responsible for this diversity are studied in detail. In addition, it presents breeding and physiological research for improving flower vase life, one of the most important traits in ornamentals, based on a model of ethylene susceptible flowers. To improve selection efficiency, genomic analysis tools including DNA markers and genetic linkage maps are also highlighted. In closing, the book discusses mutation breeding technologies such as ion-beam irradiation and genetically modified carnations.
Applications Of Rna Seq And Omics Strategies
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Author : Fabio Marchi
language : en
Publisher: BoD – Books on Demand
Release Date : 2017-09-13
Applications Of Rna Seq And Omics Strategies written by Fabio Marchi and has been published by BoD – Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-09-13 with Medical categories.
The large potential of RNA sequencing and other "omics" techniques has contributed to the production of a huge amount of data pursuing to answer many different questions that surround the science's great unknowns. This book presents an overview about powerful and cost-efficient methods for a comprehensive analysis of RNA-Seq data, introducing and revising advanced concepts in data analysis using the most current algorithms. A holistic view about the entire context where transcriptome is inserted is also discussed here encompassing biological areas with remarkable technological advances in the study of systems biology, from microorganisms to precision medicine.
Microbial Symbionts
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Author : Dhanasekaran Dharumadurai
language : en
Publisher: Elsevier
Release Date : 2022-09-25
Microbial Symbionts written by Dhanasekaran Dharumadurai and has been published by Elsevier this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-09-25 with Science categories.
Microbial Symbionts: Functions and Molecular Interactions on Host focuses on microbial symbionts of plants, animals, insects and molecular methods in the identification of microbial symbionts. The book describes the molecular mechanism and interactions of symbiosis of microbiome in plants, animals and humans. It brings the latest techniques for identification, localization and functional characterization of host-associated microbes and explains the role/importance of microbial symbionts. This comprehensive reference covers a wide range of symbiotic microorganisms used for basic and advanced techniques associated with the isolation, characterization and identification of microbial symbiotic microorganisms and their functions and molecular interactions on the host. The book will also helps users plan and execute experiments with appropriate knowledge rather than experimental trial and error in a wide range of disciplines, including Microbiology, Biotechnology, Botany and Zoology. - Provides basic knowledge and working protocols for a wide range of disciplines like Microbiology, Biotechnology, Botany and Zoology - Presents the most current information in symbiotic microbiome and holobiome - Includes color photos pertaining to techniques