Advances In Applied Bioinformatics In Crops
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Advances In Applied Bioinformatics In Crops
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Author : Mary-Ann Blätke
language : en
Publisher: Frontiers Media SA
Release Date :
Advances In Applied Bioinformatics In Crops written by Mary-Ann Blätke and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on with Science categories.
Plant Bioinformatics
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Author : David Edwards
language : en
Publisher: Humana
Release Date : 2022-02-13
Plant Bioinformatics written by David Edwards and has been published by Humana this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-02-13 with Science categories.
This new edition focuses on applied bioinformatics with specific applications to crops, model and diverse plant species. The scope extends from the genome to the phenome and includes aspects of data management, analysis, visualization, and integration. The methods and approaches found within reflect the increasing use of high performance computing infrastructure to analyze and manage the enormous volume of data being generated by the latest high throughput technologies, the establishment and further maturation of major database systems and repositories, as well as the introduction of new approaches such as machine learning. Written for the highly successful Methods in Molecular Biology series, the chapters include the kind of detailed implementation advice that leads to successful research results. Authoritative and up-to-date, Plant Bioinformatics: Methods and Protocols, Third Edition will aid researchers exploring the broad comparison of species that will drive future plant research, crop breeding, and bioinformatics developments that allow us to understand and manipulate the heritable differences between individuals and populations. Chapters 2, 3, and 26 are available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.
Bioinformatics In Agriculture
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Author : Pradeep Sharma
language : en
Publisher: Academic Press
Release Date : 2022-04-28
Bioinformatics In Agriculture written by Pradeep Sharma and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-04-28 with Technology & Engineering categories.
Bioinformatics in Agriculture: Next Generation Sequencing Era is a comprehensive volume presenting an integrated research and development approach to the practical application of genomics to improve agricultural crops. Exploring both the theoretical and applied aspects of computational biology, and focusing on the innovation processes, the book highlights the increased productivity of a translational approach. Presented in four sections and including insights from experts from around the world, the book includes: Section I: Bioinformatics and Next Generation Sequencing Technologies; Section II: Omics Application; Section III: Data mining and Markers Discovery; Section IV: Artificial Intelligence and Agribots. Bioinformatics in Agriculture: Next Generation Sequencing Era explores deep sequencing, NGS, genomic, transcriptome analysis and multiplexing, highlighting practices forreducing time, cost, and effort for the analysis of gene as they are pooled, and sequenced. Readers will gain real-world information on computational biology, genomics, applied data mining, machine learning, and artificial intelligence. This book serves as a complete package for advanced undergraduate students, researchers, and scientists with an interest in bioinformatics. Discusses integral aspects of molecular biology and pivotal tool sfor molecular breeding Enables breeders to design cost-effective and efficient breeding strategies Provides examples ofinnovative genome-wide marker (SSR, SNP) discovery Explores both the theoretical and practical aspects of computational biology with focus on innovation processes Covers recent trends of bioinformatics and different tools and techniques
The Role Of Bioinformatics In Agriculture
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Author : Santosh Kumar
language : en
Publisher: CRC Press
Release Date : 2014-02-14
The Role Of Bioinformatics In Agriculture written by Santosh Kumar and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-02-14 with Science categories.
Advances in information technology and next generation sequencing have propelled the use of bioinformatics in agriculture, especially in the area of crop improvement. An extremely large amount of genomics data is available from plants and animals due to tremendous improvements in the field. This book acquaints readers with state-of-the-art sequencing technologies, recent developments in computing algorithms, and certain biological perspectives that influence development of bioinformatics tools by giving specific examples from model plant species. The challenge is now to make sense and use of this wealth of data.
Plant Bioinformatics
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Author : Khalid Rehman Hakeem
language : en
Publisher: Springer
Release Date : 2017-11-21
Plant Bioinformatics written by Khalid Rehman Hakeem and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-11-21 with Science categories.
This book: (i) introduces fundamental and applied bioinformatics research in the field of plant life sciences; (ii) enlightens the potential users towards the recent advances in the development and application of novel computational methods available for the analysis and integration of plant -omics data; (iii) highlights relevant databases, softwares, tools and web resources developed till date to make ease of access for researchers working to decipher plant responses towards stresses; and (iv) presents a critical cross-talks on the available high-throughput data in plant research. Therefore, in addition to being a reference for the professional researchers, it is also of great interest to students and their professors. Considering immense significance of plants for all lives on Earth, the major focus of research in plant biology has been to: (a) select plants that best fit the purposes of human, (b) develop crop plants superior in quality, quantity and farming practices when compared to natural (wild) plants, and (c) explore strategies to help plants to adapt biotic and abiotic/environmental stress factors. Accordingly the development of novel techniques and their applications have increased significantly in recent years. In particular, large amount of biological data have emerged from multi-omics approaches aimed at addressing numerous aspects of the plant systems under biotic or abiotic stresses. However, even though the field is evolving at a rapid pace, information on the cross-talks and/or critical digestion of research outcomes in the context of plant bioinformatics is scarce. “Plant Bioinformatics: Decoding the Phyta” is aimed to bridge this gap.
Bioinformatics For Agriculture High Throughput Approaches
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Author : Atul Kumar Upadhyay
language : en
Publisher: Springer Nature
Release Date : 2021-03-19
Bioinformatics For Agriculture High Throughput Approaches written by Atul Kumar Upadhyay and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-03-19 with Science categories.
This book illustrates the importance and significance of bioinformatics in the field of agriculture. It first introduces the basic concepts of bioinformatics, such as homologous sequence and gene function analyses, determination of protein structures, and discusses machine learning applications for an in-depth understanding of the desired genes and proteins based on commonly used bioinformatics software and tools, e.g. BLAST, molecular modelling, molecular-docking and simulations, protein-protein and domain-domain interactions. The book also describes recent advances in the high-throughput analysis of whole genome and transcriptome using next-generation sequencing platforms, and functional proteome studies. It also examines the role of computational biology in understanding and improving the nutrient quality and yield of crops. Lastly, the book explores a comprehensive list of applications of bioinformatics to improve plant yield, biomass, and health, and the challenges involved.
Bioinformatics
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Author : David Edwards
language : en
Publisher: Springer Science & Business Media
Release Date : 2009-09-03
Bioinformatics written by David Edwards and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-09-03 with Science categories.
Bioinformatics is a relatively new field of research. It evolved from the requirement to process, characterize, and apply the information being produced by DNA sequencing technology. The production of DNA sequence data continues to grow exponentially. At the same time, improved bioinformatics such as faster DNA sequence search methods have been combined with increasingly powerful computer systems to process this information. Methods are being developed for the ever more detailed quantification of gene expression, providing an insight into the function of the newly discovered genes, while molecular genetic tools provide a link between these genes and heritable traits. Genetic tests are now available to determine the likelihood of suffering specific ailments and can predict how plant cultivars may respond to the environment. The steps in the translation of the genetic blueprint to the observed phenotype is being increasingly understood through proteome, metabolome and phenome analysis, all underpinned by advances in bioinformatics. Bioinformatics is becoming increasingly central to the study of biology, and a day at a computer can often save a year or more in the laboratory. The volume is intended for graduate-level biology students as well as researchers who wish to gain a better understanding of applied bioinformatics and who wish to use bioinformatics technologies to assist in their research. The volume would also be of value to bioinformatics developers, particularly those from a computing background, who would like to understand the application of computational tools for biological research. Each chapter would include a comprehensive introduction giving an overview of the fundamentals, aimed at introducing graduate students and researchers from diverse backgrounds to the field and bring them up-to-date on the current state of knowledge. To accommodate the broad range of topics in applied bioinformatics, chapters have been grouped into themes: gene and genome analysis, molecular genetic analysis, gene expression analysis, protein and proteome analysis, metabolome analysis, phenome data analysis, literature mining and bioinformatics tool development. Each chapter and theme provides an introduction to the biology behind the data describes the requirements for data processing and details some of the methods applied to the data to enhance biological understanding.
Advancement In Crop Improvement Techniques
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Author : Narendra Tuteja
language : en
Publisher: Woodhead Publishing
Release Date : 2020-06-13
Advancement In Crop Improvement Techniques written by Narendra Tuteja and has been published by Woodhead Publishing this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-06-13 with Technology & Engineering categories.
Advancement in Crop Improvement Techniques presents updates on biotechnology and molecular biological approaches which have contributed significantly to crop improvement. The book discusses the emerging importance of bioinformatics in analyzing the vast resources of information regarding crop improvement and its practical application and utilization. Throughout this comprehensive resource, emphasis is placed on various techniques used to improve agricultural crops, providing a common platform for the utility of these techniques and their combinations. Written by an international team of contributors, this book provides an in-depth analysis of existing tools and a framework for new research. Reviews techniques used for crop improvement, from selection and crossing over, to microorganismal approaches Explores the role of conventional biotechnology in crop improvement Summarizes the combined approaches of cytogenetics and biotechnology for crop improvement, including the importance of molecular techniques in this process Focuses on the emerging role of bioinformatics for crop improvement
Plant Bioinformatics
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Author : David Edwards
language : en
Publisher:
Release Date : 2016
Plant Bioinformatics written by David Edwards and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016 with Botany categories.
The second edition of this volume focuses on applied bioinformatics with specific applications to crops and model plants. Plant Bioinformatics: Methods and Protocols is aimed at plant biologists who have an interest in, or requirement for, accessing and manipulating huge amounts of data being generated by high throughput technologies. This book would also be of interest to bioinformaticians and computer scientists who would benefit from an introduction to the different tools and systems available for plant research. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and software, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and thorough, Plant Bioinformatics: Methods and Protocols helps researchers with the increasing volume and diversity of data from different plants and also the integration of multiple diverse forms of data.
Bioinformatics
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Author : David Edwards
language : en
Publisher: Springer
Release Date : 2014-10-07
Bioinformatics written by David Edwards and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-10-07 with Science categories.
Bioinformatics is a relatively new field of research. It evolved from the requirement to process, characterize, and apply the information being produced by DNA sequencing technology. The production of DNA sequence data continues to grow exponentially. At the same time, improved bioinformatics such as faster DNA sequence search methods have been combined with increasingly powerful computer systems to process this information. Methods are being developed for the ever more detailed quantification of gene expression, providing an insight into the function of the newly discovered genes, while molecular genetic tools provide a link between these genes and heritable traits. Genetic tests are now available to determine the likelihood of suffering specific ailments and can predict how plant cultivars may respond to the environment. The steps in the translation of the genetic blueprint to the observed phenotype is being increasingly understood through proteome, metabolome and phenome analysis, all underpinned by advances in bioinformatics. Bioinformatics is becoming increasingly central to the study of biology, and a day at a computer can often save a year or more in the laboratory. The volume is intended for graduate-level biology students as well as researchers who wish to gain a better understanding of applied bioinformatics and who wish to use bioinformatics technologies to assist in their research. The volume would also be of value to bioinformatics developers, particularly those from a computing background, who would like to understand the application of computational tools for biological research. Each chapter would include a comprehensive introduction giving an overview of the fundamentals, aimed at introducing graduate students and researchers from diverse backgrounds to the field and bring them up-to-date on the current state of knowledge. To accommodate the broad range of topics in applied bioinformatics, chapters have been grouped into themes: gene and genome analysis, molecular genetic analysis, gene expression analysis, protein and proteome analysis, metabolome analysis, phenome data analysis, literature mining and bioinformatics tool development. Each chapter and theme provides an introduction to the biology behind the data describes the requirements for data processing and details some of the methods applied to the data to enhance biological understanding.