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Algebraic And Combinatorial Computational Biology


Algebraic And Combinatorial Computational Biology
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Algebraic And Combinatorial Computational Biology


Algebraic And Combinatorial Computational Biology
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Author : Raina Robeva
language : en
Publisher: Academic Press
Release Date : 2018-10-08

Algebraic And Combinatorial Computational Biology written by Raina Robeva and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-10-08 with Mathematics categories.


Algebraic and Combinatorial Computational Biology introduces students and researchers to a panorama of powerful and current methods for mathematical problem-solving in modern computational biology. Presented in a modular format, each topic introduces the biological foundations of the field, covers specialized mathematical theory, and concludes by highlighting connections with ongoing research, particularly open questions. The work addresses problems from gene regulation, neuroscience, phylogenetics, molecular networks, assembly and folding of biomolecular structures, and the use of clustering methods in biology. A number of these chapters are surveys of new topics that have not been previously compiled into one unified source. These topics were selected because they highlight the use of technique from algebra and combinatorics that are becoming mainstream in the life sciences. - Integrates a comprehensive selection of tools from computational biology into educational or research programs - Emphasizes practical problem-solving through multiple exercises, projects and spinoff computational simulations - Contains scalable material for use in undergraduate and graduate-level classes and research projects - Introduces the reader to freely-available professional software - Supported by illustrative datasets and adaptable computer code



Combinatorial Pattern Matching Algorithms In Computational Biology Using Perl And R


Combinatorial Pattern Matching Algorithms In Computational Biology Using Perl And R
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Author : Gabriel Valiente
language : en
Publisher: CRC Press
Release Date : 2009-04-08

Combinatorial Pattern Matching Algorithms In Computational Biology Using Perl And R written by Gabriel Valiente and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-04-08 with Computers categories.


Emphasizing the search for patterns within and between biological sequences, trees, and graphs, Combinatorial Pattern Matching Algorithms in Computational Biology Using Perl and R shows how combinatorial pattern matching algorithms can solve computational biology problems that arise in the analysis of genomic, transcriptomic, proteomic, metabolomic



Algebraic Statistics For Computational Biology


Algebraic Statistics For Computational Biology
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Author : L. Pachter
language : en
Publisher: Cambridge University Press
Release Date : 2005-08-22

Algebraic Statistics For Computational Biology written by L. Pachter and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2005-08-22 with Mathematics categories.


This book, first published in 2005, offers an introduction to the application of algebraic statistics to computational biology.



Combinatorial Commutative Algebra


Combinatorial Commutative Algebra
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Author : Ezra Miller
language : en
Publisher: Springer Science & Business Media
Release Date : 2005-06-21

Combinatorial Commutative Algebra written by Ezra Miller and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2005-06-21 with Mathematics categories.


Recent developments are covered Contains over 100 figures and 250 exercises Includes complete proofs



From Linear Operators To Computational Biology


From Linear Operators To Computational Biology
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Author : Martin Davis
language : en
Publisher: Springer Science & Business Media
Release Date : 2012-07-28

From Linear Operators To Computational Biology written by Martin Davis and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-07-28 with Computers categories.


In his rich and varied career as a mathematician, computer scientist, and educator, Jacob T. Schwartz wrote seminal works in analysis, mathematical economics, programming languages, algorithmics, and computational geometry. In this volume of essays, his friends, students, and collaborators at the Courant Institute of Mathematical Sciences present recent results in some of the fields that Schwartz explored: quantum theory, the theory and practice of programming, program correctness and decision procedures, dextrous manipulation in Robotics, motion planning, and genomics. In addition to presenting recent results in these fields, these essays illuminate the astonishingly productive trajectory of a brilliant and original scientist and thinker.



Biomathematical Modeling


Biomathematical Modeling
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Author : Olcay Akman
language : en
Publisher: Walter de Gruyter GmbH & Co KG
Release Date : 2025-05-19

Biomathematical Modeling written by Olcay Akman and has been published by Walter de Gruyter GmbH & Co KG this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-05-19 with Mathematics categories.


Welcome to the fascinating intersection of mathematics, biology, and ecology! This book is intended primarily as a resource for teachers planning to teach their first introductory course on modeling in mathematical biology and/or ecology. This being said, it can also be used by students preparing to embark on an independent studies project in one of these fields; or, by researchers unfamiliar with the methods or software introduced who are seeking an accessible and quick introduction to one of the methods and/or software presented here; or, by curious biologists, ecologists, or mathematicians who may be unfamiliar with "the other side;" or, maybe, by the perpetual learner who is intrigued by the dynamics of living ecosystems. For each of the above, this book is designed to be an accessible introduction to the captivating landscape of biomathematics. The approach used in this book takes advantage of technology in leading readers on a journey that bridges seemingly distinct fields through introductions to three methods and software platforms: Compartmental models with Berkeley Madonna; agent-based models with NetLogo; and cluster analysis through selforganizing maps using an R Shiny app. This is not intended to be a textbook (though it may be used as one), nor is it a purely mathematics book or one purely about deeper aspects of biology or ecology. It focuses on three selected ways in which the intersection of mathematics and biology (and mathematics and ecology) can be explored with the help of software. Moreover, the manner in which the content is presented makes it possible to use this book to help prepare for an introductory course at a wide range of levels, depending on the discipline within which the course is taught and the mathematical prerequisites for the course. There are four chapters, the first of which presents the reader with a bit of background information followed by suggestions on how to get the most out of this book. The three core chapters introduce the three previously mentioned methods and software in a manner envisioned to be accessible to most.



Advances In Bioinformatics And Computational Biology


Advances In Bioinformatics And Computational Biology
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Author : Nicole M. Scherer
language : en
Publisher: Springer Nature
Release Date : 2022-12-15

Advances In Bioinformatics And Computational Biology written by Nicole M. Scherer and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-12-15 with Science categories.


This book constitutes the proceedings of the 15th Brazilian Symposium on Bioinformatics on Advances in Bioinformatics and Computational Biology, BSB 2022, which took place in Buzios, Brazil, in September 2022. The 10 full papers and 7 short papers presented in this volume were carefully reviewed and selected from 23 submissions. The papers focus on bioinformatics, computational biology, Biological Databases, Biological Networks, Cheminformatics, Evolutionary Genomics, Computational Proteomics, Systems Biology, Drug Design, Genomics, Machine Learning applications in Bioinformatics, Metagenomics, Molecular Docking and Modeling, Molecular Evolution and Phylogenetics, Protein Structure and Modeling, Proteomics, Transcriptomics, Single-Cell Analysis, Workflows in Bioinformatics.



Combinatorial Mathematics


Combinatorial Mathematics
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Author : Douglas B. West
language : en
Publisher: Cambridge University Press
Release Date : 2021

Combinatorial Mathematics written by Douglas B. West and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021 with Mathematics categories.


This is the most readable and thorough graduate textbook and reference for combinatorics, covering enumeration, graphs, sets, and methods.



Combinatorial Algebraic Topology


Combinatorial Algebraic Topology
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Author : Dimitry Kozlov
language : en
Publisher: Springer Science & Business Media
Release Date : 2007-10-24

Combinatorial Algebraic Topology written by Dimitry Kozlov and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-10-24 with Mathematics categories.


This volume is the first comprehensive treatment of combinatorial algebraic topology in book form. The first part of the book constitutes a swift walk through the main tools of algebraic topology. Readers - graduate students and working mathematicians alike - will probably find particularly useful the second part, which contains an in-depth discussion of the major research techniques of combinatorial algebraic topology. Although applications are sprinkled throughout the second part, they are principal focus of the third part, which is entirely devoted to developing the topological structure theory for graph homomorphisms.



The Manifold Object Of Language


The Manifold Object Of Language
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Author : Noury Bakrim
language : en
Publisher: BoD - Books on Demand
Release Date : 2022-12-05

The Manifold Object Of Language written by Noury Bakrim and has been published by BoD - Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-12-05 with Mathematics categories.


This book is the third component in the ROAL model; it suggests a relation between language and mathematical models of totality relying on verifiability and observability/objectivity models of the linguistic text. In addition of the biomathematical hypothesis, rules of observability and objectivity have been extended to both objective and non-objective models toward a manifolded dimension of the structure within a field dimension of consciousness in which dwells the paradigm of the text as a meta-observability domain for language and natural/individual languages.