Basic Phylogenetic Combinatorics
DOWNLOAD
Download Basic Phylogenetic Combinatorics PDF/ePub or read online books in Mobi eBooks. Click Download or Read Online button to get Basic Phylogenetic Combinatorics book now. This website allows unlimited access to, at the time of writing, more than 1.5 million titles, including hundreds of thousands of titles in various foreign languages. If the content not found or just blank you must refresh this page
Basic Phylogenetic Combinatorics
DOWNLOAD
Author : Andreas Dress
language : en
Publisher: Cambridge University Press
Release Date : 2012
Basic Phylogenetic Combinatorics written by Andreas Dress and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012 with Mathematics categories.
The first book to systematically introduce the emerging area of phylogenetic combinatorics.
Combinatorics Of Genome Rearrangements
DOWNLOAD
Author : Guillaume Fertin
language : en
Publisher: MIT Press
Release Date : 2009
Combinatorics Of Genome Rearrangements written by Guillaume Fertin and has been published by MIT Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with Combinatorial analysis categories.
A comprehensive survey of a rapidly expanding field of combinatorial optimization, mathematically oriented but offering biological explanations when required. From one cell to another, from one individual to another, and from one species to another, the content of DNA molecules is often similar. The organization of these molecules, however, differs dramatically, and the mutations that affect this organization are known as genome rearrangements. Combinatorial methods are used to reconstruct putative rearrangement scenarios in order to explain the evolutionary history of a set of species, often formalizing the evolutionary events that can explain the multiple combinations of observed genomes as combinatorial optimization problems. This book offers the first comprehensive survey of this rapidly expanding application of combinatorial optimization. It can be used as a reference for experienced researchers or as an introductory text for a broader audience. Genome rearrangement problems have proved so interesting from a combinatorial point of view that the field now belongs as much to mathematics as to biology. This book takes a mathematically oriented approach, but provides biological background when necessary. It presents a series of models, beginning with the simplest (which is progressively extended by dropping restrictions), each constructing a genome rearrangement problem. The book also discusses an important generalization of the basic problem known as the median problem, surveys attempts to reconstruct the relationships between genomes with phylogenetic trees, and offers a collection of summaries and appendixes with useful additional information.
Handbook Of Discrete And Combinatorial Mathematics
DOWNLOAD
Author : Kenneth H. Rosen
language : en
Publisher: CRC Press
Release Date : 2017-10-19
Handbook Of Discrete And Combinatorial Mathematics written by Kenneth H. Rosen and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-10-19 with Mathematics categories.
Handbook of Discrete and Combinatorial Mathematics provides a comprehensive reference volume for mathematicians, computer scientists, engineers, as well as students and reference librarians. The material is presented so that key information can be located and used quickly and easily. Each chapter includes a glossary. Individual topics are covered in sections and subsections within chapters, each of which is organized into clearly identifiable parts: definitions, facts, and examples. Examples are provided to illustrate some of the key definitions, facts, and algorithms. Some curious and entertaining facts and puzzles are also included. Readers will also find an extensive collection of biographies. This second edition is a major revision. It includes extensive additions and updates. Since the first edition appeared in 1999, many new discoveries have been made and new areas have grown in importance, which are covered in this edition.
Phylogeny
DOWNLOAD
Author : Mike Steel
language : en
Publisher: SIAM
Release Date : 2016-09-29
Phylogeny written by Mike Steel and has been published by SIAM this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-09-29 with Science categories.
Phylogenetics is a topical and growing area of research. Phylogenies (phylogenetic trees and networks) allow biologists to study and graph evolutionary relationships between different species. These are also used to investigate other evolutionary processes?for example, how languages developed or how different strains of a virus (such as HIV or influenza) are related to each other. This self-contained book addresses the underlying mathematical theory behind the reconstruction and analysis of phylogenies. The theory is grounded in classical concepts from discrete mathematics and probability theory as well as techniques from other branches of mathematics (algebra, topology, differential equations). The biological relevance of the results is highlighted throughout. The author supplies proofs of key classical theorems and includes results not covered in existing books, emphasizes relevant mathematical results derived over the past 20 years, and provides numerous exercises, examples, and figures.
Essentials Of Tropical Combinatorics
DOWNLOAD
Author : Michael Joswig
language : en
Publisher: American Mathematical Society
Release Date : 2021-12-08
Essentials Of Tropical Combinatorics written by Michael Joswig and has been published by American Mathematical Society this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-12-08 with Mathematics categories.
The goal of this book is to explain, at the graduate student level, connections between tropical geometry and optimization. Building bridges between these two subject areas is fruitful in two ways. Through tropical geometry optimization algorithms become applicable to questions in algebraic geometry. Conversely, looking at topics in optimization through the tropical geometry lens adds an additional layer of structure. The author covers contemporary research topics that are relevant for applications such as phylogenetics, neural networks, combinatorial auctions, game theory, and computational complexity. This self-contained book grew out of several courses given at Technische Universität Berlin and elsewhere, and the main prerequisite for the reader is a basic knowledge in polytope theory. It contains a good number of exercises, many examples, beautiful figures, as well as explicit tools for computations using $texttt{polymake}$.
Phylogenetic Combinatorics
DOWNLOAD
Author : Andreas Dress
language : en
Publisher:
Release Date : 2008
Phylogenetic Combinatorics written by Andreas Dress and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with categories.
The Future Of Phylogenetic Systematics
DOWNLOAD
Author : David Williams
language : en
Publisher: Cambridge University Press
Release Date : 2016-07-21
The Future Of Phylogenetic Systematics written by David Williams and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-07-21 with Science categories.
This book documents Willi Hennig's founding of phylogenetic systematics and the relevancy of his work for the future of cladistics.
Computing And Combinatorics
DOWNLOAD
Author : Thang N. Dinh
language : en
Publisher: Springer
Release Date : 2016-07-19
Computing And Combinatorics written by Thang N. Dinh and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-07-19 with Computers categories.
This book constitutes the refereed proceedings of the 22nd International Conference on Computing and Combinatorics, COCOON 2016, held in Ho Chi Minh City, Vietnam, in August 2016. The 50 revised full papers papers presented in this book were carefully reviewed and selected from various submissions. The papers cover various topics including: Theory and Algorithms; Parameterized Complexity and Algorithms; Database and Data Structures; Computational Complexity; Approximation Algorithms; Cryptography; Network and Algorithms; Graph Theory and Algorithms; Computational Geometry; Scheduling Algorithms and Circuit Complexity; Computational Geometry and Computational Biology; and Logic, Algebra and Automata.
Recombinatorics
DOWNLOAD
Author : Dan Gusfield
language : en
Publisher: MIT Press
Release Date : 2014-07-03
Recombinatorics written by Dan Gusfield and has been published by MIT Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-07-03 with Mathematics categories.
When a Philadelphia girl intercepts a message about an impending British attack against her father's regiment, commanded by General Washington, in White Marsh, she travels alone by horseback to warn the Patriot army.
Bioinformatics And Phylogenetics
DOWNLOAD
Author : Tandy Warnow
language : en
Publisher: Springer
Release Date : 2019-04-08
Bioinformatics And Phylogenetics written by Tandy Warnow and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-04-08 with Science categories.
This volume presents a compelling collection of state-of-the-art work in algorithmic computational biology, honoring the legacy of Professor Bernard M.E. Moret in this field. Reflecting the wide-ranging influences of Prof. Moret’s research, the coverage encompasses such areas as phylogenetic tree and network estimation, genome rearrangements, cancer phylogeny, species trees, divide-and-conquer strategies, and integer linear programming. Each self-contained chapter provides an introduction to a cutting-edge problem of particular computational and mathematical interest. Topics and features: addresses the challenges in developing accurate and efficient software for the NP-hard maximum likelihood phylogeny estimation problem; describes the inference of species trees, covering strategies to scale phylogeny estimation methods to large datasets, and the construction of taxonomic supertrees; discusses the inference of ultrametric distances from additive distance matrices, and the inference of ancestral genomes under genome rearrangement events; reviews different techniques for inferring evolutionary histories in cancer, from the use of chromosomal rearrangements to tumor phylogenetics approaches; examines problems in phylogenetic networks, including questions relating to discrete mathematics, and issues of statistical estimation; highlights how evolution can provide a framework within which to understand comparative and functional genomics; provides an introduction to Integer Linear Programming and its use in computational biology, including its use for solving the Traveling Salesman Problem. Offering an invaluable source of insights for computer scientists, applied mathematicians, and statisticians, this illuminating volume will also prove useful for graduate courses on computational biology and bioinformatics.