Bioinformatics Practical Manual

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Bioinformatics Manual

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Author : Prof Mohammed
language : en
Publisher: Prof Mohammed
Release Date : 2014-06-24

Bioinformatics Manual written by Prof Mohammed and has been published by Prof Mohammed this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-06-24 with Biography & Autobiography categories.

This book has originated from Practical class on bioinformatics that are offered to students of Bioinformatics, Bangalore University of Bangalore. The idea to write a book on Bioinformatics was born during the preparations of these practical where I realized that it is extremely difficult to achieve an overview of the area of Bioinformatics and to follow the progress of this field. This is the first book in 2014 and was written in English .Bioinformatics is a major topic in modern medical, Life science and pharmacological research and is of central importance in the computational biology science. Accordingly, The enormous increase in data on Bioinformatics has led me to leave out the practical on bioinformatics and. This topic has since evolved into a huge research area of its own that could not be considered adequately within this book. My knowledge of Bioinformatics practical has exploded in the past 5 years, Bioinformatics could be treated here with the same thoroughness. It is the aim of the present book to describe the Bioinformatics practical approach for life science students.

Bioinformatics Practical Manual

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Author : Prof Mohammed Iftekhar
language : en
Publisher: Createspace Independent Publishing Platform
Release Date : 2015-09-28

Bioinformatics Practical Manual written by Prof Mohammed Iftekhar and has been published by Createspace Independent Publishing Platform this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-09-28 with Science categories.

1. ACCESSING BIBLIOGRAPHIC DATABASE FROM NCBI 2. RETRIEVING PROTEIN / NUCLEOTIDE SEQUENCE INFORMATION FROM NCBI DATABASE3. RESTRICTION MAPPING4. SIMILARITY SEARCH USING FASTA TOOL FROM EMBL5. SIMILARITY SEARCH USING BLAST TOOL FROM NCBI6. PAIRWISE SEQUENCE ALIGNEMENT -EMBOSS SUITE7. MULTIPLE SEQUENCE ALIGNMENT - CLUSTAL OMEGA8. EVOLUTIONALRY RELATIONSHIP- PHYLOGENETIC ANALYSIS - TREE VIEW9. PDB RETRIEVING 10. MOLECULAR VISUALIZATION-RASMOL11. IDENTIFICATION OF GENE (HMGA2) IN HUMAN GENOME & Primer Designing12. INTRODUCTION TO AUTODOCK13. CALCULATION OF SD, VARIANCE, GRAPH PLOT - MS EXCEL14. OPEN READING FRAME FROM - NCBI15. RAMACHANDRAN PLOT

Bioinformatics Practical Manual

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Author : Dr. Shashank Rana
language : en
Publisher: Manojvm Publishing House
Release Date : 2020-09-22

Bioinformatics Practical Manual written by Dr. Shashank Rana and has been published by Manojvm Publishing House this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-09-22 with Computers categories.

Bioinformatics

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Author : K. Kasturi
language : en
Publisher: Pharmamed Press
Release Date : 2018-07-02

Bioinformatics written by K. Kasturi and has been published by Pharmamed Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-07-02 with Medical categories.

The Science of Bioinformatics is important for the professionals in the fields of Biotechnology, Biochemistry and Computer Science. The basic practical knowledge about various databases and tools of Bioinformatics have been covered. This provides a perfect practical exposure for students pursuing Bioinformatics at graduate and postgraduate levels. Contents 1. Biological Databases 2. Sequence Analysis 3. Nucleic Acid Feature Identification 4. Protein Structure Prediction 5. Structure Vizualisation Tools 6. Molecular Modelling 7. Drug - Docking

Practical Bioinformatics

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Author : Sufang Wang
language : en
Publisher: Springer
Release Date : 2025-08-11

Practical Bioinformatics written by Sufang Wang and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-08-11 with Medical categories.

This book is a lab manual which can be integrated with bioinformatics course. The field of bioinformatics is advancing at a remarkable rate. With the development of new analytical techniques that make use of the latest advances in machine learning and data science, today’s biologists are gaining fantastic new insights into the natural world’s most complex systems. This book includes a lab-based manual that can assist students handling large biological data. It aims to help students and researchers understand (1) the importance of horizontal transfer in the spread of antibiotic resistance, and in biology more broadly; (2) how protein and nucleic acid sequences are used to determine phylogenetic trees and the genetic relationship between organisms; (3) how sequence comparisons can be used to infer protein function; and (4) how to analyze high-throughput sequencing data to do gene expression analysis. This book is valuable for researchers, teachers and students, as well as any readers who are interested in bioinformatics.

Laboratory Manual On Biotechnology

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Author : P. M. Swamy
language : en
Publisher: Rastogi Publications
Release Date : 2008

Laboratory Manual On Biotechnology written by P. M. Swamy and has been published by Rastogi Publications this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with Biotechnology categories.

Bioinformatics Computing

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Author : Bryan P. Bergeron
language : en
Publisher: Prentice Hall Professional
Release Date : 2003

Bioinformatics Computing written by Bryan P. Bergeron and has been published by Prentice Hall Professional this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with Computers categories.

Comprehensive and concise, this handbook has chapters on computing visualization, large database designs, advanced pattern matching and other key bioinformatics techniques. It is a practical guide to computing in the growing field of Bioinformatics--the study of how information is represented and transmitted in biological systems, starting at the molecular level.

The Practical Bioinformatician

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Author : Limsoon Wong
language : en
Publisher: World Scientific
Release Date : 2004-05-24

The Practical Bioinformatician written by Limsoon Wong and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004-05-24 with Medical categories.

Computer scientists have increasingly been enlisted as “bioinformaticians” to assist molecular biologists in their research. This book is a practical introduction to bioinformatics for these computer scientists. The chapters are in-depth discussions by expert bioinformaticians on both general techniques and specific approaches to a range of selected bioinformatics problems. The book is organized into clusters of chapters on the following topics:• Overview of modern molecular biology and a broad spectrum of techniques from computer science — data mining, machine learning, mathematical modeling, sequence alignment, data integration, workflow development, etc.• In-depth discussion of computational recognition of functional and regulatory sites in DNA sequences.• Incisive discussion of computational prediction of secondary structure of RNA sequences.• Overview of computational prediction of protein cellular localization, and selected discussions of inference of protein function.• Overview of methods for discovering protein-protein interactions.• Detailed discussion of approaches to gene expression analysis for the diagnosis of diseases, the treatment of diseases, and the understanding of gene functions.• Case studies on analysis of phylogenies, functional annotation of proteins, construction of purpose-built integrated biological databases, and development of workflows underlying the large-scale-effort gene discovery.

Bioinformatics

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Author : Andreas D. Baxevanis
language : en
Publisher: John Wiley & Sons
Release Date : 2004-03-24

Bioinformatics written by Andreas D. Baxevanis and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004-03-24 with Computers categories.

"In this book, Andy Baxevanis and Francis Ouellette . . . haveundertaken the difficult task of organizing the knowledge in thisfield in a logical progression and presenting it in a digestibleform. And they have done an excellent job. This fine text will makea major impact on biological research and, in turn, on progress inbiomedicine. We are all in their debt." —Eric Lander from the Foreword Reviews from the First Edition "...provides a broad overview of the basic tools for sequenceanalysis ... For biologists approaching this subject for the firsttime, it will be a very useful handbook to keep on the shelf afterthe first reading, close to the computer." —Nature Structural Biology "...should be in the personal library of any biologist who usesthe Internet for the analysis of DNA and protein sequencedata." —Science "...a wonderful primer designed to navigate the novice throughthe intricacies of in scripto analysis ... The accomplished genesearcher will also find this book a useful addition to theirlibrary ... an excellent reference to the principles ofbioinformatics." —Trends in Biochemical Sciences This new edition of the highly successful Bioinformatics:A Practical Guide to the Analysis of Genes and Proteinsprovides a sound foundation of basic concepts, with practicaldiscussions and comparisons of both computational tools anddatabases relevant to biological research. Equipping biologists with the modern tools necessary to solvepractical problems in sequence data analysis, the Second Editioncovers the broad spectrum of topics in bioinformatics, ranging fromInternet concepts to predictive algorithms used on sequence,structure, and expression data. With chapters written by experts inthe field, this up-to-date reference thoroughly covers vitalconcepts and is appropriate for both the novice and the experiencedpractitioner. Written in clear, simple language, the book isaccessible to users without an advanced mathematical or computerscience background. This new edition includes: All new end-of-chapter Web resources, bibliographies, andproblem sets Accompanying Web site containing the answers to the problems,as well as links to relevant Web resources New coverage of comparative genomics, large-scale genomeanalysis, sequence assembly, and expressed sequence tags A glossary of commonly used terms in bioinformatics andgenomics Bioinformatics: A Practical Guide to the Analysis of Genesand Proteins, Second Edition is essential reading forresearchers, instructors, and students of all levels in molecularbiology and bioinformatics, as well as for investigators involvedin genomics, positional cloning, clinical research, andcomputational biology.

Bioinformatics

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Author : Hamid D. Ismail
language : en
Publisher: CRC Press
Release Date : 2022-03-22

Bioinformatics written by Hamid D. Ismail and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022-03-22 with Science categories.

Bioinformatics: A Practical Guide to NCBI Databases and Sequence Alignments provides the basics of bioinformatics and in-depth coverage of NCBI databases, sequence alignment, and NCBI Sequence Local Alignment Search Tool (BLAST). As bioinformatics has become essential for life sciences, the book has been written specifically to address the need of a large audience including undergraduates, graduates, researchers, healthcare professionals, and bioinformatics professors who need to use the NCBI databases, retrieve data from them, and use BLAST to find evolutionarily related sequences, sequence annotation, construction of phylogenetic tree, and the conservative domain of a protein, to name just a few. Technical details of alignment algorithms are explained with a minimum use of mathematical formulas and with graphical illustrations. Key Features Provides readers with the most-used bioinformatics knowledge of bioinformatics databases and alignments including both theory and application via illustrations and worked examples. Discusses the use of Windows Command Prompt, Linux shell, R, and Python for both Entrez databases and BLAST. The companion website (http://www.hamiddi.com/instructors/) contains tutorials, R and Python codes, instructor materials including slides, exercises, and problems for students. This is the ideal textbook for bioinformatics courses taken by students of life sciences and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.