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Essential Computing Skills For Biologists

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Essential Computing Skills For Biologists

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Author : Ziling Wang
language : en
Publisher: World Scientific
Release Date : 2018-07-02

Essential Computing Skills For Biologists written by Ziling Wang and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-07-02 with Science categories.

This is a handbook of methods and protocols for biologists. It aimed at undergraduate, graduate students and researchers originally trained in biological or medical sciences who need to know how to access the data archives of genomes, proteins, metabolites, gene expression profiles and the questions these data and tools can answer. For each chapter, the conceptual and experimental background is provided, together with specific guidelines for handling raw data, including preprocessing and analysis.The content is structured into three parts. Part one introduces basic knowledge about popular bioinformatics tools, databases and web resources. Part two presents examples of omics bioinformatics applications. Part three provides basic statistical analysis skills and programming skills needed to handle and analyze omics datasets.

Computing Skills For Biologists

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Author : Stefano Allesina
language : en
Publisher: Princeton University Press
Release Date : 2019-01-15

Computing Skills For Biologists written by Stefano Allesina and has been published by Princeton University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-01-15 with Computers categories.

A concise introduction to key computing skills for biologists While biological data continues to grow exponentially in size and quality, many of today’s biologists are not trained adequately in the computing skills necessary for leveraging this information deluge. In Computing Skills for Biologists, Stefano Allesina and Madlen Wilmes present a valuable toolbox for the effective analysis of biological data. Based on the authors’ experiences teaching scientific computing at the University of Chicago, this textbook emphasizes the automation of repetitive tasks and the construction of pipelines for data organization, analysis, visualization, and publication. Stressing practice rather than theory, the book’s examples and exercises are drawn from actual biological data and solve cogent problems spanning the entire breadth of biological disciplines, including ecology, genetics, microbiology, and molecular biology. Beginners will benefit from the many examples explained step-by-step, while more seasoned researchers will learn how to combine tools to make biological data analysis robust and reproducible. The book uses free software and code that can be run on any platform. Computing Skills for Biologists is ideal for scientists wanting to improve their technical skills and instructors looking to teach the main computing tools essential for biology research in the twenty-first century. Excellent resource for acquiring comprehensive computing skills Both novice and experienced scientists will increase efficiency by building automated and reproducible pipelines for biological data analysis Code examples based on published data spanning the breadth of biological disciplines Detailed solutions provided for exercises in each chapter Extensive companion website

Developing Bioinformatics Computer Skills

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Author : Cynthia Gibas
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001

Developing Bioinformatics Computer Skills written by Cynthia Gibas and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001 with Computers categories.

This practical, hands-on guide shows how to develop a structured approach to biological data and the tools needed to analyze it. It's aimed at scientists and students learning computational approaches to biological data, as well as experienced biology researchers starting to use computers to handle data.

Computing Skills For Biologists

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Author : Stefano Allesina
language : en
Publisher: Princeton University Press
Release Date : 2019-01-15

Practical Computing For Biologists

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Author : Steven H.D. Haddock
language : en
Publisher: Sinauer
Release Date : 2011-04-22

Practical Computing For Biologists written by Steven H.D. Haddock and has been published by Sinauer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-04-22 with Medical categories.

Practical Computing for Biologists shows you how to use many freely available computing tools to work more powerfully and effectively. The book was born out of the authors' own experience in developing tools for their research and helping other biologists with their computational problems. Many of the techniques are relevant to molecular bioinformatics but the scope of the book is much broader, covering topics and techniques that are applicable to a range of scientific endeavours. Twenty-two chapters organized into six parts address the following topics (and more; see Contents): • Searching with regular expressions • The Unix command line • Python programming and debugging • Creating and editing graphics • Databases • Performing analyses on remote servers • Working with electronics While the main narrative focuses on Mac OS X, most of the concepts and examples apply to any operating system. Where there are differences for Windows and Linux users, parallel instructions are provided in the margin and in an appendix. The book is designed to be used as a self-guided resource for researchers, a companion book in a course, or as a primary textbook. Practical Computing for Biologists will free you from the most frustrating and time-consuming aspects of data processing so you can focus on the pleasures of scientific inquiry.

Bioinformatics Data Skills

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Author : Vince Buffalo
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2015-07

Bioinformatics Data Skills written by Vince Buffalo and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-07 with Computers categories.

Learn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, youâ??ll learn how to use freely available open source tools to extract meaning from large complex biological data sets. At no other point in human history has our ability to understand lifeâ??s complexities been so dependent on our skills to work with and analyze data. This intermediate-level book teaches the general computational and data skills you need to analyze biological data. If you have experience with a scripting language like Python, youâ??re ready to get started. Go from handling small problems with messy scripts to tackling large problems with clever methods and tools Process bioinformatics data with powerful Unix pipelines and data tools Learn how to use exploratory data analysis techniques in the R language Use efficient methods to work with genomic range data and range operations Work with common genomics data file formats like FASTA, FASTQ, SAM, and BAM Manage your bioinformatics project with the Git version control system Tackle tedious data processing tasks with with Bash scripts and Makefiles

Introduction To Matlab For Biologists

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Author : Cerian Ruth Webb
language : en
Publisher: Springer
Release Date : 2019-08-01

Introduction To Matlab For Biologists written by Cerian Ruth Webb and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-08-01 with Science categories.

This textbook takes you from the very first time you open MATLAB® through to a position where you can comfortably integrate this computer language into your research or studies. The book will familiarise you with the MATLAB interface, show you how to use the program ́s built-in functions and carefully guide you towards creating your own functions and scripts so that you can use MATLAB as a sophisticated tool to support your own research. A central aim of this book is to provide you with the core knowledge and skills required to become a confident MATLAB user so that you can find and make use of the many specialist functions and toolboxes that have been developed to support a wide range of biological applications. Examples presented within the book are selected to be relevant to biological scientists and they illustrate some of the many ways the program can be incorporated into, and used to enhance, your own research and studies. The textbook is a must-have for students and researchers in the biological sciences. It will also appeal to readers of all backgrounds who are looking for an introduction to MATLAB which is suitable for those with little or no experience of programming.

Occupational Outlook Handbook 2002 03

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Author : U. S. Department of Labor, Bureau of Labor Statistics Staff
language : en
Publisher:
Release Date : 2002-04

Occupational Outlook Handbook 2002 03 written by U. S. Department of Labor, Bureau of Labor Statistics Staff and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2002-04 with Business & Economics categories.

Toxicological Risk Assessment For Beginners

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Author : José A. Torres
language : en
Publisher: Springer
Release Date : 2015-03-27

Toxicological Risk Assessment For Beginners written by José A. Torres and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-03-27 with Medical categories.

This book serves as a comprehensive introductory guide to the practical aspects of risk assessment. Chapters include clearly defined objectives and summaries. The book includes: hazard identification, dose-response, exposure assessment, risk characterization, chemical mixtures, epidemiology, emerging issues and global perspectives with accessible language. The book concludes with a set of hypothetical case studies. Toxicological Risk Assessment for Beginners aims not to create an expert, but rather to provide readers with their first understanding of the risk assessment topic. This book was designed with the student in mind. We simplify a complex process for beginners and balance theory with practical aspects, but remain fluid enough to increase difficulty with case studies. By incorporating an action based, step by step approach to learning the risk assessment process, this book provides its readers with an elementary understanding of how the risk assessment process is initiated, developed and finished, making it a valuable guide for graduate students, post-doctoral fellows and early career scientists in industry.

Computer Fundamental Office Automation Bca First Semester

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Author : Vishnu Dutt
language : en
Publisher: Chyren Publication
Release Date : 2025-06-27

Computer Fundamental Office Automation Bca First Semester written by Vishnu Dutt and has been published by Chyren Publication this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-06-27 with Antiques & Collectibles categories.

Essential Computing Skills For Biologists

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