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Genome Enabled Discovery Of Carbon Sequestration Genes


Genome Enabled Discovery Of Carbon Sequestration Genes
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Genome Enabled Discovery Of Carbon Sequestration Genes In Poplar


Genome Enabled Discovery Of Carbon Sequestration Genes In Poplar
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Author :
language : en
Publisher:
Release Date : 2007

Genome Enabled Discovery Of Carbon Sequestration Genes In Poplar written by and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007 with categories.


Plants utilize carbon by partitioning the reduced carbon obtained through photosynthesis into different compartments and into different chemistries within a cell and subsequently allocating such carbon to sink tissues throughout the plant. Since the phytohormones auxin and cytokinin are known to influence sink strength in tissues such as roots (Skoog & Miller 1957, Nordstrom et al. 2004), we hypothesized that altering the expression of genes that regulate auxin-mediated (e.g., AUX/IAA or ARF transcription factors) or cytokinin-mediated (e.g., RR transcription factors) control of root growth and development would impact carbon allocation and partitioning belowground (Fig. 1 - Renewal Proposal). Specifically, the ARF, AUX/IAA and RR transcription factor gene families mediate the effects of the growth regulators auxin and cytokinin on cell expansion, cell division and differentiation into root primordia. Invertases (IVR), whose transcript abundance is enhanced by both auxin and cytokinin, are critical components of carbon movement and therefore of carbon allocation. Thus, we initiated comparative genomic studies to identify the AUX/IAA, ARF, RR and IVR gene families in the Populus genome that could impact carbon allocation and partitioning. Bioinformatics searches using Arabidopsis gene sequences as queries identified regions with high degrees of sequence similarities in the Populus genome. These Populus sequences formed the basis of our transgenic experiments. Transgenic modification of gene expression involving members of these gene families was hypothesized to have profound effects on carbon allocation and partitioning.



Genome Enabled Discovery Of Carbon Sequestration Genes


Genome Enabled Discovery Of Carbon Sequestration Genes
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Author :
language : en
Publisher:
Release Date : 2009

Genome Enabled Discovery Of Carbon Sequestration Genes written by and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with categories.


The fate of carbon below ground is likely to be a major factor determining the success of carbon sequestration strategies involving plants. Despite their importance, molecular processes controlling belowground C allocation and partitioning are poorly understood. This project is leveraging the Populus trichocarpa genome sequence to discover genes important to C sequestration in plants and soils. The focus is on the identification of genes that provide key control points for the flow and chemical transformations of carbon in roots, concentrating on genes that control the synthesis of chemical forms of carbon that result in slower turnover rates of soil organic matter (i.e., increased recalcitrance). We propose to enhance carbon allocation and partitioning to roots by 1) modifying the auxin signaling pathway, and the invertase family, which controls sucrose metabolism, and by 2) increasing root proliferation through transgenesis with genes known to control fine root proliferation (e.g., ANT), 3) increasing the production of recalcitrant C metabolites by identifying genes controlling secondary C metabolism by a major mQTL-based gene discovery effort, and 4) increasing aboveground productivity by enhancing drought tolerance to achieve maximum C sequestration. This broad, integrated approach is aimed at ultimately enhancing root biomass as well as root detritus longevity, providing the best prospects for significant enhancement of belowground C sequestration.



Genomics Enabled Crop Genetics


Genomics Enabled Crop Genetics
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Author : Yin Li
language : en
Publisher: Frontiers Media SA
Release Date : 2021-06-24

Genomics Enabled Crop Genetics written by Yin Li and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-06-24 with Science categories.




Review Of The Department Of Energy S Genomics Gtl Program


Review Of The Department Of Energy S Genomics Gtl Program
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Author : National Research Council
language : en
Publisher: National Academies Press
Release Date : 2006-04-19

Review Of The Department Of Energy S Genomics Gtl Program written by National Research Council and has been published by National Academies Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-04-19 with Science categories.


The U.S. Department of Energy (DOE) promotes scientific and technological innovation to advance the national, economic, and energy security of the United States. Recognizing the potential of microorganisms to offer new energy alternatives and remediate environmental contamination, DOE initiated the Genomes to Life program, now called Genomics: GTL, in 2000. The program aims to develop a predictive understanding of microbial systems that can be used to engineer systems for bioenergy production and environmental remediation, and to understand carbon cycling and sequestration. This report provides an evaluation of the program and its infrastructure plan. Overall, the report finds that GTL's research has resulted in and promises to deliver many more scientific advancements that contribute to the achievement of DOE's goals. However, the DOE's current plan for building four independent facilities for protein production, molecular imaging, proteome analysis, and systems biology sequentially may not be the most cost-effective, efficient, and scientifically optimal way to provide this infrastructure. As an alternative, the report suggests constructing up to four institute-like facilities, each of which integrates the capabilities of all four of the originally planned facility types and focuses on one or two of DOE's mission goals. The alternative infrastructure plan could have an especially high ratio of scientific benefit to cost because the need for technology will be directly tied to the biology goals of the program.



Annual Research Report


Annual Research Report
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Author : University of Florida. Institute of Food and Agricultural Sciences
language : en
Publisher:
Release Date : 2004

Annual Research Report written by University of Florida. Institute of Food and Agricultural Sciences and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004 with Agriculture categories.




Modern Biocatalysis


Modern Biocatalysis
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Author : Gavin Williams
language : en
Publisher: Royal Society of Chemistry
Release Date : 2018-05-31

Modern Biocatalysis written by Gavin Williams and has been published by Royal Society of Chemistry this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-05-31 with Science categories.


The synergy between synthetic biology and biocatalysis is emerging as an important trend for future sustainable processes. This book reviews all modern and novel techniques successfully implemented in biocatalysis, in an effort to provide better performing enzymatic systems and novel biosynthetic routes to (non-)natural products. This includes the use of molecular techniques in protein design and engineering, construction of artificial metabolic pathways, and application of computational methods for enzyme discovery and design. Stress is placed on current ‘hot’ topics in biocatalysis, where recent advances in research are defining new grounds in enzyme-catalyzed processes. With contributions from leading academics around the world, this book makes a ground-breaking contribution to this progressive field and is essential reading for graduates and researchers investigating (bio)catalysis, enzyme engineering, chemical biology, and synthetic biology.



Annual Research Report Of The Florida Agricultural Experiment Station Institute Of Food And Agricultural Sciences University Of Florida Gainesville Florida


Annual Research Report Of The Florida Agricultural Experiment Station Institute Of Food And Agricultural Sciences University Of Florida Gainesville Florida
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Author : University of Florida. Agricultural Experiment Station
language : en
Publisher:
Release Date : 2003

Annual Research Report Of The Florida Agricultural Experiment Station Institute Of Food And Agricultural Sciences University Of Florida Gainesville Florida written by University of Florida. Agricultural Experiment Station and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with Agriculture categories.




Annual Research Report


Annual Research Report
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Author : University of Florida. College of Engineering
language : en
Publisher:
Release Date : 2004

Annual Research Report written by University of Florida. College of Engineering and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004 with Engineering categories.




Next Steps For Functional Genomics


Next Steps For Functional Genomics
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Author : National Academies of Sciences, Engineering, and Medicine
language : en
Publisher: National Academies Press
Release Date : 2020-12-18

Next Steps For Functional Genomics written by National Academies of Sciences, Engineering, and Medicine and has been published by National Academies Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-12-18 with Science categories.


One of the holy grails in biology is the ability to predict functional characteristics from an organism's genetic sequence. Despite decades of research since the first sequencing of an organism in 1995, scientists still do not understand exactly how the information in genes is converted into an organism's phenotype, its physical characteristics. Functional genomics attempts to make use of the vast wealth of data from "-omics" screens and projects to describe gene and protein functions and interactions. A February 2020 workshop was held to determine research needs to advance the field of functional genomics over the next 10-20 years. Speakers and participants discussed goals, strategies, and technical needs to allow functional genomics to contribute to the advancement of basic knowledge and its applications that would benefit society. This publication summarizes the presentations and discussions from the workshop.



Applications Of Toxicogenomic Technologies To Predictive Toxicology And Risk Assessment


Applications Of Toxicogenomic Technologies To Predictive Toxicology And Risk Assessment
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Author : National Research Council
language : en
Publisher: National Academies Press
Release Date : 2007-11-19

Applications Of Toxicogenomic Technologies To Predictive Toxicology And Risk Assessment written by National Research Council and has been published by National Academies Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-11-19 with Science categories.


The new field of toxicogenomics presents a potentially powerful set of tools to better understand the health effects of exposures to toxicants in the environment. At the request of the National Institute of Environmental Health Sciences, the National Research Council assembled a committee to identify the benefits of toxicogenomics, the challenges to achieving them, and potential approaches to overcoming such challenges. The report concludes that realizing the potential of toxicogenomics to improve public health decisions will require a concerted effort to generate data, make use of existing data, and study data in new waysâ€"an effort requiring funding, interagency coordination, and data management strategies.