Practical Bioinformatics For Beginners From Raw Sequence Analysis To Machine Learning Applications
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Practical Bioinformatics For Beginners From Raw Sequence Analysis To Machine Learning Applications
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Author : Lloyd Wai Yee Low
language : en
Publisher: World Scientific
Release Date : 2023-01-17
Practical Bioinformatics For Beginners From Raw Sequence Analysis To Machine Learning Applications written by Lloyd Wai Yee Low and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-01-17 with Science categories.
Next-Generation Sequencing (NGS) is increasingly common and has applications in various fields such as clinical diagnosis, animal and plant breeding, and conservation of species. This incredible tool has become cost-effective. However, it generates a deluge of sequence data that requires efficient analysis. The highly sought-after skills in computational and statistical analyses include machine learning and, are essential for successful research within a wide range of specializations, such as identifying causes of cancer, vaccine design, new antibiotics, drug development, personalized medicine, and increased crop yields in agriculture.This invaluable book provides step-by-step guides to complex topics that make it easy for readers to perform specific analyses, from raw sequenced data to answer important biological questions using machine learning methods. It is an excellent hands-on material for lecturers who conduct courses in bioinformatics and as reference material for professionals. The chapters are standalone recipes making them suitable for readers who wish to self-learn selected topics. Readers gain the essential skills necessary to work on sequenced data from NGS platforms; hence, making themselves more attractive to employers who need skilled bioinformaticians.
Bioinformatics
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Author : Hamid D. Ismail
language : en
Publisher: CRC Press
Release Date : 2023-06-29
Bioinformatics written by Hamid D. Ismail and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-06-29 with Computers categories.
This book contains the latest material in the subject, covering next generation sequencing (NGS) applications and meeting the requirements of a complete semester course. This book digs deep into analysis, providing both concept and practice to satisfy the exact need of researchers seeking to understand and use NGS data reprocessing, genome assembly, variant discovery, gene profiling, epigenetics, and metagenomics. The book does not introduce the analysis pipelines in a black box, but with detailed analysis steps to provide readers with the scientific and technical backgrounds required to enable them to conduct analysis with confidence and understanding. The book is primarily designed as a companion for researchers and graduate students using sequencing data analysis but will also serve as a textbook for teachers and students in biology and bioscience.
Bioinformatics Second Edition
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Author : Pierre Baldi
language : en
Publisher: MIT Press
Release Date : 2001-07-20
Bioinformatics Second Edition written by Pierre Baldi and has been published by MIT Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-07-20 with Computers categories.
A guide to machine learning approaches and their application to the analysis of biological data. An unprecedented wealth of data is being generated by genome sequencing projects and other experimental efforts to determine the structure and function of biological molecules. The demands and opportunities for interpreting these data are expanding rapidly. Bioinformatics is the development and application of computer methods for management, analysis, interpretation, and prediction, as well as for the design of experiments. Machine learning approaches (e.g., neural networks, hidden Markov models, and belief networks) are ideally suited for areas where there is a lot of data but little theory, which is the situation in molecular biology. The goal in machine learning is to extract useful information from a body of data by building good probabilistic models—and to automate the process as much as possible. In this book Pierre Baldi and Søren Brunak present the key machine learning approaches and apply them to the computational problems encountered in the analysis of biological data. The book is aimed both at biologists and biochemists who need to understand new data-driven algorithms and at those with a primary background in physics, mathematics, statistics, or computer science who need to know more about applications in molecular biology. This new second edition contains expanded coverage of probabilistic graphical models and of the applications of neural networks, as well as a new chapter on microarrays and gene expression. The entire text has been extensively revised.
Bioinformatics
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Author : Rob Botwright
language : en
Publisher: Rob Botwright
Release Date : 101-01-01
Bioinformatics written by Rob Botwright and has been published by Rob Botwright this book supported file pdf, txt, epub, kindle and other format this book has been release on 101-01-01 with Science categories.
Introducing the Ultimate Bioinformatics Book Bundle! Dive into the world of bioinformatics with our comprehensive book bundle, featuring four essential volumes that cover everything from foundational concepts to advanced applications. Whether you're a student, researcher, or practitioner in the life sciences, this bundle has something for everyone. Book 1: Bioinformatics Basics Get started with the basics of bioinformatics in this introductory volume. Learn about algorithms, concepts, and principles that form the backbone of bioinformatics research. From sequence analysis to genetic variation, this book lays the groundwork for understanding the fundamental aspects of bioinformatics. Book 2: Coding in Bioinformatics Take your skills to the next level with our coding-focused volume. Explore scripting languages like Python and R, and discover how to apply them to bioinformatics tasks. From data manipulation to machine learning, this book covers a wide range of coding techniques and applications in bioinformatics. Book 3: Exploring Data Science in Bioinformatics Delve into the world of data science and its applications in bioinformatics. Learn about exploratory data analysis, statistical inference, and machine learning techniques tailored specifically for biological data. With practical examples and case studies, this book helps you extract meaningful insights from complex datasets. Book 4: Mastering Biostatistics in Bioinformatics Unlock the power of biostatistics with our advanced methods volume. Explore cutting-edge statistical techniques for analyzing biological data, including survival analysis, meta-analysis, and more. Whether you're conducting experimental studies or analyzing clinical data, this book equips you with the tools you need to draw meaningful conclusions. Why Choose Our Bundle? · Comprehensive Coverage: Covering everything from basic concepts to advanced methods, this bundle provides a complete overview of bioinformatics. · Practical Focus: With hands-on coding exercises and real-world examples, our books emphasize practical skills and applications. · Expert Authors: Authored by experts in the field of bioinformatics, each book offers valuable insights and expertise. · Versatile Learning: Whether you're a beginner or an experienced practitioner, our bundle caters to learners of all levels. Don't miss out on this opportunity to enhance your skills and knowledge in bioinformatics. Order your copy of the Bioinformatics Book Bundle today!
Practical Bioinformatics
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Author : Janusz M. Bujnicki
language : en
Publisher: Springer Science & Business Media
Release Date : 2004-03-03
Practical Bioinformatics written by Janusz M. Bujnicki and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004-03-03 with Computers categories.
Bridges the gap between bioinformaticists and molecular biologists, i.e. the developers and the users of computational methods for biological data analysis and in that it presents examples of practical applications of the bioinformatics tools in the "daily practice" of an experimental research scientist.
The Practical Bioinformatician
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Author : Limsoon Wong
language : en
Publisher: World Scientific
Release Date : 2004
The Practical Bioinformatician written by Limsoon Wong and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2004 with Medical categories.
Computer scientists have increasingly been enlisted as "bioinformaticians" to assist molecular biologists in their research. This book is a practical introduction to bioinformatics for these computer scientists. The chapters are in-depth discussions by expert bioinformaticians on both general techniques and specific approaches to a range of selected bioinformatics problems. The book is organized into clusters of chapters on the following topics: - Overview of modern molecular biology and a broad spectrum of techniques from computer science -- data mining, machine learning, mathematical modeling, sequence alignment, data integration, workflow development, etc. - In-depth discussion of computational recognition of functional and regulatory sites in DNA sequences. - Incisive discussion of computational prediction of secondary structure of RNA sequences. - Overview of computational prediction of protein cellular localization, and selected discussions of inference of protein function. - Overview of methods for discovering protein-protein interactions. - Detailed discussion of approaches to gene expression analysis for the diagnosis of diseases, the treatment of diseases, and the understanding of gene functions. - Case studies on analysis of phylogenies, functional annotation of proteins, construction of purposebuilt integrated biological databases, and development of workflows underlying the large-scale-effort gene discovery. - Written in a practical, in-depth tutorial style - Covers a broad range of bioinformatics topics and of techniques used in bioinformatics - Comprehensive overviews of the development of various approaches in a number of selectedtopics - In-depth exposition of a number of important topics - Contributions by prominent researchers: Vladimir Bajic, Ming Li, Kenta Nakai, Limsoon Wong, Cathy Wu, etc. - Extensive, integrated references to background liter
Bioinformatics For Beginners
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Author : Supratim Choudhuri
language : en
Publisher: Elsevier
Release Date : 2014-05-09
Bioinformatics For Beginners written by Supratim Choudhuri and has been published by Elsevier this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-05-09 with Medical categories.
Bioinformatics for Beginners: Genes, Genomes, Molecular Evolution, Databases and Analytical Tools provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses the relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis and demonstrates, with examples, targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis, also pointing to further study options. Avoids non-essential coverage, yet fully describes the field for beginners Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Contains over 100 figures that aid in concept discovery and illustration
Bioinformatics A Practical Handbook Of Next Generation Sequencing And Its Applications
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Author : Low Lloyd Wai Yee
language : en
Publisher: #N/A
Release Date : 2017-07-26
Bioinformatics A Practical Handbook Of Next Generation Sequencing And Its Applications written by Low Lloyd Wai Yee and has been published by #N/A this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-07-26 with Computers categories.
Rapid technological developments have led to increasingly efficient sequencing approaches. Next Generation Sequencing (NGS) is increasingly common and has become cost-effective, generating an explosion of sequenced data that need to be analyzed. The skills required to apply computational analysis to target research on a wide range of applications that include identifying causes of cancer, vaccine design, new antibiotics, drug development, personalized medicine and higher crop yields in agriculture are highly sought after. This invaluable book provides step-by-step guides to complex topics that make it easy for readers to perform essential analyses from raw sequenced data to answering important biological questions. It is an excellent hands-on material for teachers who conduct courses in bioinformatics and as a reference material for professionals. The chapters are written to be standalone recipes making it suitable for readers who wish to self-learn selected topics. Readers will gain skills necessary to work on sequenced data from NGS platforms and hence making themselves more attractive to employers who need skilled bioinformaticians to handle the deluge of data.
Deep Learning For Biomedical Data Analysis
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Author : Mourad Elloumi
language : en
Publisher: Springer Nature
Release Date : 2021-07-13
Deep Learning For Biomedical Data Analysis written by Mourad Elloumi and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-07-13 with Medical categories.
This book is the first overview on Deep Learning (DL) for biomedical data analysis. It surveys the most recent techniques and approaches in this field, with both a broad coverage and enough depth to be of practical use to working professionals. This book offers enough fundamental and technical information on these techniques, approaches and the related problems without overcrowding the reader's head. It presents the results of the latest investigations in the field of DL for biomedical data analysis. The techniques and approaches presented in this book deal with the most important and/or the newest topics encountered in this field. They combine fundamental theory of Artificial Intelligence (AI), Machine Learning (ML) and DL with practical applications in Biology and Medicine. Certainly, the list of topics covered in this book is not exhaustive but these topics will shed light on the implications of the presented techniques and approaches on other topics in biomedical data analysis. The book finds a balance between theoretical and practical coverage of a wide range of issues in the field of biomedical data analysis, thanks to DL. The few published books on DL for biomedical data analysis either focus on specific topics or lack technical depth. The chapters presented in this book were selected for quality and relevance. The book also presents experiments that provide qualitative and quantitative overviews in the field of biomedical data analysis. The reader will require some familiarity with AI, ML and DL and will learn about techniques and approaches that deal with the most important and/or the newest topics encountered in the field of DL for biomedical data analysis. He/she will discover both the fundamentals behind DL techniques and approaches, and their applications on biomedical data. This book can also serve as a reference book for graduate courses in Bioinformatics, AI, ML and DL. The book aims not only at professional researchers and practitioners but also graduate students, senior undergraduate students and young researchers. This book will certainly show the way to new techniques and approaches to make new discoveries.
Applying Machine Learning Techniques To Bioinformatics Few Shot And Zero Shot Methods
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Author : Lilhore, Umesh Kumar
language : en
Publisher: IGI Global
Release Date : 2024-03-22
Applying Machine Learning Techniques To Bioinformatics Few Shot And Zero Shot Methods written by Lilhore, Umesh Kumar and has been published by IGI Global this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-03-22 with Computers categories.
Why are cutting-edge data science techniques such as bioinformatics, few-shot learning, and zero-shot learning underutilized in the world of biological sciences?. In a rapidly advancing field, the failure to harness the full potential of these disciplines limits scientists ability to unlock critical insights into biological systems, personalized medicine, and biomarker identification. This untapped potential hinders progress and limits our capacity to tackle complex biological challenges. The solution to this issue lies within the pages of Applying Machine Learning Techniques to Bioinformatics. This book serves as a powerful resource, offering a comprehensive analysis of how these emerging disciplines can be effectively applied to the realm of biological research. By addressing these challenges and providing in-depth case studies and practical implementations, the book equips researchers, scientists, and curious minds with the knowledge and techniques needed to navigate the ever-changing landscape of bioinformatics and machine learning within the biological sciences.