Statistical Physics Of Biomolecules
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Statistical Physics Of Biomolecules
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Author : Daniel M. Zuckerman
language : en
Publisher: CRC Press
Release Date : 2010-06-02
Statistical Physics Of Biomolecules written by Daniel M. Zuckerman and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-06-02 with Mathematics categories.
It is essential for modern students of molecular behavior to understand the statistical/chemical physics at the heart of modern molecular science. But traditional presentations of this material are often difficult to penetrate. This volume brings "down to earth" some of the most intimidating but important theories of molecular biophysics. Students build understanding by focusing on topics such as probability theory, low-dimensional models, and the simplest molecular systems. The book's accessible development of equilibrium and dynamical statistical physics makes this a valuable text for students with limited physics and chemistry backgrounds.
Statistical Physics Of Biomolecules
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Author : Taylor & Francis Group
language : en
Publisher:
Release Date : 2010-11-16
Statistical Physics Of Biomolecules written by Taylor & Francis Group and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-11-16 with categories.
Statistical Physics For Biological Matter
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Author : Wokyung Sung
language : en
Publisher: Springer
Release Date : 2018-10-19
Statistical Physics For Biological Matter written by Wokyung Sung and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-10-19 with Science categories.
This book aims to cover a broad range of topics in statistical physics, including statistical mechanics (equilibrium and non-equilibrium), soft matter and fluid physics, for applications to biological phenomena at both cellular and macromolecular levels. It is intended to be a graduate level textbook, but can also be addressed to the interested senior level undergraduate. The book is written also for those involved in research on biological systems or soft matter based on physics, particularly on statistical physics. Typical statistical physics courses cover ideal gases (classical and quantum) and interacting units of simple structures. In contrast, even simple biological fluids are solutions of macromolecules, the structures of which are very complex. The goal of this book to fill this wide gap by providing appropriate content as well as by explaining the theoretical method that typifies good modeling, namely, the method of coarse-grained descriptions that extract the most salient features emerging at mesoscopic scales. The major topics covered in this book include thermodynamics, equilibrium statistical mechanics, soft matter physics of polymers and membranes, non-equilibrium statistical physics covering stochastic processes, transport phenomena and hydrodynamics. Generic methods and theories are described with detailed derivations, followed by applications and examples in biology. The book aims to help the readers build, systematically and coherently through basic principles, their own understanding of nonspecific concepts and theoretical methods, which they may be able to apply to a broader class of biological problems.
Computational Biology
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Author : Ralf Blossey
language : en
Publisher: CRC Press
Release Date : 2006-05-25
Computational Biology written by Ralf Blossey and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-05-25 with Science categories.
Quantitative methods have a particular knack for improving any field they touch. For biology, computational techniques have led to enormous strides in our understanding of biological systems, but there is still vast territory to cover. Statistical physics especially holds great potential for elucidating the structural-functional relationships in biomolecules, as well as their static and dynamic properties. Breaking New Ground Computational Biology: A Statistical Mechanics Perspective is the first book dedicated to the interface between statistical physics and bioinformatics. Introducing both equilibrium and nonequilibrium statistical mechanics in a manner tailored to computational biologists, the author applies these methods to understand and model the properties of various biomolecules and biological networks at the systems level. Unique Vision, Novel Approach Blossey combines his enthusiasm for uniting the fields of physics and computational biology with his considerable experience, knowledge, and gift for teaching. He uses numerous examples and tasks to illustrate and test understanding of the concepts, and he supplies a detailed keyword list for easy navigation and comprehension. His approach takes full advantage of the latest tools in statistical physics and computer science to build a strong set of tools for confronting new challenges in computational biology. Making the concepts crystal clear without sacrificing mathematical rigor, Computational Biology: A Statistical Mechanics Perspective is the perfect tool to broaden your skills in computational biology.
Exploring Life Phenomena With Statistical Mechanics Of Molecular Liquids
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Author : Fumio Hirata
language : en
Publisher: CRC Press
Release Date : 2020
Exploring Life Phenomena With Statistical Mechanics Of Molecular Liquids written by Fumio Hirata and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020 with Molecular Conformation categories.
In a living body, a variety of molecules are working in a concerted manner to maintain its life, and to carry forward the genetic information from generation to generation. A key word to understand such processes is "water," which plays an essential role in life phenomena. This book sheds light on life phenomena, which are woven by biomolecules as warp and water as weft, by means of statistical mechanics of molecular liquids, the RISM and 3D-RISM theories, both in equilibrium and non-equilibrium. A considerable number of pages are devoted to basics of mathematics and physics, so that students who have not majored in physics may be able to study the book by themselves. The book will also be helpful to those scientists seeking better tools for the computer-aided-drug-discovery. Explains basics of the statistical mechanics of molecular liquids, or RISM and 3D-RISM theories, and its application to water. Provides outline of the generalized Langevin theory and the linear response theory, and its application to dynamics of water. Applies the theories to functions of biomolecular systems. Applies the theories to the computer aided drug design. Provides a perspective for future development of the method.
Stochastic Dynamics Of Reacting Biomolecules
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Author : Werner Ebeling
language : en
Publisher: World Scientific
Release Date : 2002
Stochastic Dynamics Of Reacting Biomolecules written by Werner Ebeling and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2002 with Mathematics categories.
This is a book about the physical processes in reacting complex molecules, particularly biomolecules. In the past decade scientists from different fields such as medicine, biology, chemistry and physics have collected a huge amount of data about the structure, dynamics and functioning of biomolecules. Great progress has been achieved in exploring the structure of complex molecules. However, there is still a lack of understanding of the dynamics and functioning of biological macromolecules. In particular this refers to enzymes, which are the basic molecular machines working in living systems. This book contributes to the exploration of the physical mechanisms of these processes, focusing on critical aspects such as the role of nonlinear excitations and of stochastic effects. An extensive range of original results has been obtained in the last few years by the authors, and these results are presented together with a comprehensive survey of the state of the art in the field. Contents: Introduction to the Reaction Theory and Cluster Dynamics of Enzymes (W Ebeling, A Netrebko & Yu Romanovsky); Tools of Stochastic Dynamics (L Schimansky-Geier & P Talkner); Motion of Test Particles in a 2-D Potential Landscape (O A Chichigina, A V Netrebko & N V Netrebko); Microscopic Simulations of Activation and Dissociation (W Ebeling, V Yu Podlipchuk, M G Sapeshinsky & A A Valuev); Excitations on Rings of Molecules (A Chetverikov, W Ebeling, M Jenssen & Yu Romanovsky); Fermi Resonance and Kramers Problem in 2-D Force Field (S V Kroo, A V Netrebko, Yu M Romanovsky & L Schimansky-Geier); Molecular Scissors. Cluster Model of Acetylcholinesterase (A Yu Chikishev, S V Kroo, A V Netrebko, N V Netrebko & Yu Romanovsky); Dynamics of Proton Transfer in the Active Site of Chymotrypsin (A Yu Chikishev, B A Grishanin & E V Shuvalova); On the Damping of Cluster Oscillations in Protein Molecules (A Yu Chikishev, A V Netrebko & Yu M Romanovsky); Protein Dynamics and New Approaches to the Molecular Mechanisms of Protein Functioning (K V Shaitan). Readership: Researchers and graduate students in physics, biophysics, molecular biology and the life sciences; experts on nonlinear dynamics and the stochastic process in molecular systems and biomolecules.
Solvation Effects On Molecules And Biomolecules
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Author : Sylvio Canuto
language : en
Publisher: Springer Science & Business Media
Release Date : 2010-07-03
Solvation Effects On Molecules And Biomolecules written by Sylvio Canuto and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-07-03 with Science categories.
This volume is an interdisciplinary treatise on the theoretical approach to solvation problems. It describes the essential details of the theoretical methods and places them into the context of modern applications, and hence is of broad interest to theoreticians and experimentalists. The assembly of these modern methods and applications into one volume is a unique contribution to date and gives a broad and ample description of the field in its present stage of development.
Water And Biomolecules
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Author : Kunihiro Kuwajima
language : en
Publisher: Springer Science & Business Media
Release Date : 2009-03-18
Water And Biomolecules written by Kunihiro Kuwajima and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-03-18 with Science categories.
Life is produced by the interplay of water and biomolecules. This book deals with the physicochemical aspects of such life phenomena produced by water and biomolecules, and addresses topics including "Protein Dynamics and Functions", "Protein and DNA Folding", and "Protein Amyloidosis". All sections have been written by internationally recognized front-line researchers. The idea for this book was born at the 5th International Symposium "Water and Biomolecules", held in Nara city, Japan, in 2008.
Complex Materials In Physics And Biology
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Author : Società italiana di fisica
language : en
Publisher: IOS Press
Release Date : 2012
Complex Materials In Physics And Biology written by Società italiana di fisica and has been published by IOS Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012 with Language Arts & Disciplines categories.
The surprising connections which have developed between physics and various fields as diverse as biology and economics now constitute the fascinating research area known as complex materials and systems. The study of complex materials and processes is rapidly expanding, and many important experimental and theoretical discoveries have been made in recent years. Statistical physics is key to exploring this new and expanding field, enabling an understanding of real-world phenomena compromised of complex materials or exhibiting complex processes. This book includes lectures presented at the CLXXVI International School of Physics oEnrico Fermio, held in Varenna, Italy, in July 2010. The school focused on recent advances and developing perspectives in the study of complex materials and processes, as related to physics and biology. The book provides both an introduction and a complete presentation of recent theoretical and experimental developments for each topic.Topics addressed include: scaling and universality, supra-molecular systems and solutions, polymer systems, static and dynamics of liquid water, arrested dynamics and jamming, dynamics of out of equilibrium systems, physics of confined liquids, granular matter, physics of biological and medical systems, networks in physical and social sciences, turbulence in physics, biology and economics and finally, switching phenomena in biology and economics. The book provides reviews of these cutting edge topics by leading authorities and will be a reference work useful to both advanced research professionals and beginning graduate students.
Modeling Solvent Environments
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Author : Michael Feig
language : en
Publisher: John Wiley & Sons
Release Date : 2009-12-09
Modeling Solvent Environments written by Michael Feig and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-12-09 with Science categories.
A comprehensive view of the current methods for modeling solvent environments with contributions from the leading researchers in the field. Throughout, the emphasis is placed on the application of such models in simulation studies of biological processes, although the coverage is sufficiently broad to extend to other systems as well. As such, this monograph treats a full range of topics, from statistical mechanics-based approaches to popular mean field formalisms, coarse-grained solvent models, more established explicit, fully atomic solvent models, and recent advances in applying ab initio methods for modeling solvent properties.