Structural Theories For Dynamical Networks In Biology
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Structural Theories For Dynamical Networks In Biology
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Author : Atsushi Mochizuki
language : en
Publisher: Springer Nature
Release Date : 2025-06-21
Structural Theories For Dynamical Networks In Biology written by Atsushi Mochizuki and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-06-21 with Science categories.
This textbook provides an introduction to theoretical biology using specific topics and explains the main mathematical methods. The book also introduces the “structural theories” developed by the author and his colleagues as new theoretical methods. Structural theories are mathematical theories that determine key aspects of the behavior of dynamical systems from network information alone. The book details the practical applications of these methods across several biological network systems and shows that they are practically useful for analyzing the behaviors of biological systems. The first half of the book focuses on the dynamics that arise from the regulation of biomolecular activity, such as gene expression and protein modification. The second half of the book approaches the understanding of the dynamics of complex systems composed of many biomolecules. Each chapter covers current and important topics in biological research, and its description of how biological phenomena are theoretically elucidated effectively conveys the importance and appeal of mathematical methods. This book is not only a comprehensive textbook on theoretical biology, but also a study guide for learning mathematical methods. It also serves as a specialized reference for systematically learning new mathematical theories. The “Mathematical Methods” section at the end of each chapter offers a concise summary and facilitates efficient learning for readers, along with the exercises. Target readers of this book are from upper undergraduate students to senior researchers interested in the dynamics of complex network systems in biology. It appeals to both mathematical and experimental biologists, as well as chemists and physicists.
Structural Theories For Dynamical Networks In Biology
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Author : Atsushi Mochizuki
language : en
Publisher: Springer
Release Date : 2025-06-18
Structural Theories For Dynamical Networks In Biology written by Atsushi Mochizuki and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-06-18 with Science categories.
This textbook provides an introduction to theoretical biology using specific topics and explains the main mathematical methods. The book also introduces the “structural theories” developed by the author and his colleagues as new theoretical methods. Structural theories are mathematical theories that determine key aspects of the behavior of dynamical systems from network information alone. The book details the practical applications of these methods across several biological network systems and shows that they are practically useful for analyzing the behaviors of biological systems. The first half of the book focuses on the dynamics that arise from the regulation of biomolecular activity, such as gene expression and protein modification. The second half of the book approaches the understanding of the dynamics of complex systems composed of many biomolecules. Each chapter covers current and important topics in biological research, and its description of how biological phenomena are theoretically elucidated effectively conveys the importance and appeal of mathematical methods. This book is not only a comprehensive textbook on theoretical biology, but also a study guide for learning mathematical methods. It also serves as a specialized reference for systematically learning new mathematical theories. The “Mathematical Methods” section at the end of each chapter offers a concise summary and facilitates efficient learning for readers, along with the exercises. Target readers of this book are from upper undergraduate students to senior researchers interested in the dynamics of complex network systems in biology. It appeals to both mathematical and experimental biologists, as well as chemists and physicists.
Networks From Biology To Theory
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Author : Jianfeng Feng
language : en
Publisher: Springer Science & Business Media
Release Date : 2007-09-04
Networks From Biology To Theory written by Jianfeng Feng and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007-09-04 with Computers categories.
Recent decades have witnessed the thriving development of new mathematical, computational and theoretical approaches, such as bioinformatics and neuroinformatics, to tackle fundamental issues in biology. These approaches focus no longer on individual units, such as nerve cells or genes, but rather on dynamic patterns of interactions between them. This volume explores the concept in full, featuring contributions from a global group of contributors, many of whom are pre-eminent in their field.
Structure And Dynamics Of Asymmetric Interactions
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Author : Naohito Chino
language : en
Publisher: Springer Nature
Release Date : 2025-01-03
Structure And Dynamics Of Asymmetric Interactions written by Naohito Chino and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-01-03 with Mathematics categories.
This book integrates the fundamentals of asymmetric multidimensional scaling, spectral graph theory, graph embedding theory, and various dynamical systems theories, that deal with the static and dynamic aspects of asymmetric phenomena. In this way, it provides a comprehensive introduction to theories and methods for analyzing phenomena observed universally in social, behavioral, economical, geographical, biological, neural, chemical reaction and other networks. The topics addressed in here include the notions of asymmetric similarity matrices, graph spectra, dimension reduction, and difference and differential equations to describe the dynamics of networks, bifurcation of vector fields, Mandelbrot sets, fractals and chaos, and Hilbert spaces. Illustrated by carefully chosen examples and supported by extensive simulation studies, the book is highly recommended to readers who seek to discover static asymmetric structures among members or nodes. It also appeals to those who want to understand the kinds of dynamics that are theoretically possible in their research domains.
Molecular Level Atomistic And Structural Insights On Biological Macromolecules Inhibition And Dynamics Studies
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Author : Chandrabose Selvaraj
language : en
Publisher: Frontiers Media SA
Release Date : 2024-03-14
Molecular Level Atomistic And Structural Insights On Biological Macromolecules Inhibition And Dynamics Studies written by Chandrabose Selvaraj and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-03-14 with Science categories.
Everything in a living organism relies on biological macromolecules, which have the role of enzymatic chemical transformations, formation of structures, transportation, catalysis, and regulation of biological processes. They are complex biological structures that require an atomistic understanding. A molecular understanding of biological macromolecules has had a massive impact on the pharmaceutical, biotechnological, and chemical industries. Specifically, new enzymatic structures are being discovered through various experimental and computational methods, by describing an atomistic-level insight into function, mechanism, role in reactions and their inhibition. Those atom-level illustrations are mainly focused through enzyme kinetics, enzyme inhibition, mutational and conformational analysis through quantum mechanical and molecular dynamics methods.
Computational Chemistry Methods In Structural Biology
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Author : Christo Christov
language : en
Publisher: Academic Press
Release Date : 2011-09-23
Computational Chemistry Methods In Structural Biology written by Christo Christov and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-09-23 with Science categories.
Published continuously since 1944, the Advances in Protein Chemistry and Structural Biology serial has been a continuous, essential resource for protein chemists. Covering reviews of methodology and research in all aspects of protein chemistry, including purification/expression, proteomics, modeling and structural determination and design, each volume brings forth new information about protocols and analysis of proteins while presenting the most recent findings from leading experts in a broad range of protein-related topics. This volume features articles on Computational Chemistry methods in Structural Biology. Essential resource for protein chemists This volume features articles on Computational Chemistry methods in Structural Biology
Systems Biology
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Author : Edda Klipp
language : en
Publisher: John Wiley & Sons
Release Date : 2013-06-20
Systems Biology written by Edda Klipp and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-06-20 with Medical categories.
This advanced textbook is tailored to the needs of introductory course in Systems Biology. It has a compagnion website (www.wiley-vch.de/home/systemsbiology)with solutions to questions in the book and several additional extensive working models. The book is related to the very successful previous title 'Systems Biology in Practice' and has incorporated the feedback and suggestions from many lecturers worldwide. The book addresses biologists as well as engineers and computer scientists. The interdisciplinary team of acclaimed authors worked closely together to ensure a comprehensive coverage with no overlaps in a homogenous and compelling style.
Microrna Regulatory Network Structure And Function
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Author : Zengrong Liu
language : en
Publisher: Springer
Release Date : 2018-11-02
Microrna Regulatory Network Structure And Function written by Zengrong Liu and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-11-02 with Science categories.
This book discusses topics related to the topological structure and biological function of gene networks regulated by microRNAs. It focuses on analyzing the relation between topological structure and biological function, applying these theoretical results to gene networks involving microRNA, illustrating their biological mechanisms, and identifying the roles of microRNA in controlling various phenomena emerging from the networks. In addition, the book explains how to control the complex biological phenomena using mathematical tools and offers a new perspective on studying microRNA. It is a useful resource for graduate students and researchers who are working on or interested in microRNAs and gene network.
From Energetics To Ecosystems The Dynamics And Structure Of Ecological Systems
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Author : N. Rooney
language : en
Publisher: Springer Science & Business Media
Release Date : 2006-12-02
From Energetics To Ecosystems The Dynamics And Structure Of Ecological Systems written by N. Rooney and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-12-02 with Science categories.
Ecosystems are complex and enigmatic entities that are ultimately our life support systems. This book explores developments that unfold when math and physics meet ecology. Leading ecologists examine ecosystems from theoretical, experimental, and empirical viewpoints. The book begins by simplifying and synthesizing nature’s complex relationships. It then moves on to explore the mapping between food web structure and function and ends with the role of theory in integrating different research areas.
Handbook Of Ecosystem Theories And Management
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Author : Felix Muller
language : en
Publisher: CRC Press
Release Date : 2000-02-10
Handbook Of Ecosystem Theories And Management written by Felix Muller and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2000-02-10 with Technology & Engineering categories.
As part of the Environmental and Ecological Modeling Handbooks series, the Handbook of Ecosystem Theories and Management provides a comprehensive overview of ecosystem theory and the tools - ecological engineering, ecological modeling, ecotoxicology and ecological economics -to manage these systems. The book is laid out to provide a summary or survey of each topic, using many tables and figures. Concepts, definitions, important findings, basic hypotheses, important correlations between theories and observation with illustrative graphs are included. The comprehensive treatment of ecosystem theory and application of theoretical tools, and the integration of classical theory and real world examples, sets this book apart. It covers newly emerging topical areas as well as nontraditional topical areas (i.e. chaos) that will interest professionals trained in previous decades and enlighten those now entering into formal training. The general approach taken by the authors makes this an essential reference and handbook for professionals and students.