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Bioinformatics Analyses Of Alternative Splicing


Bioinformatics Analyses Of Alternative Splicing
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Bioinformatics Analyses Of Alternative Splicing


Bioinformatics Analyses Of Alternative Splicing
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Author : Rileen Sinha
language : en
Publisher:
Release Date : 2009

Bioinformatics Analyses Of Alternative Splicing written by Rileen Sinha and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with categories.




Bioinformatics Analyses Of Alternative Splicing


Bioinformatics Analyses Of Alternative Splicing
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Author : Michael Hiller
language : en
Publisher:
Release Date : 2006

Bioinformatics Analyses Of Alternative Splicing written by Michael Hiller and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006 with categories.




Bioinformatics Analyses Of Alternative Splicing Est Based And Machine Learning Based Prediction


Bioinformatics Analyses Of Alternative Splicing Est Based And Machine Learning Based Prediction
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Author : Jing Xia
language : en
Publisher:
Release Date : 2008

Bioinformatics Analyses Of Alternative Splicing Est Based And Machine Learning Based Prediction written by Jing Xia and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with categories.


Alternative splicing is a mechanism for generating different gene transcripts (called iso- forms) from the same genomic sequence. Finding alternative splicing events experimentally is both expensive and time consuming. Computational methods in general, and EST analy- sis and machine learning algorithms in particular, can be used to complement experimental methods in the process of identifying alternative splicing events. In this thesis, I first iden- tify alternative splicing exons by analyzing EST-genome alignment. Next, I explore the predictive power of a rich set of features that have been experimentally shown to affect al- ternative splicing. I use these features to build support vector machine (SVM) classifiers for distinguishing between alternatively spliced exons and constitutive exons. My results show that simple, linear SVM classifiers built from a rich set of features give results comparable to those of more sophisticated SVM classifiers that use more basic sequence features. Finally, I use feature selection methods to identify computationally the most informative features for the prediction problem considered.



Bioinformatics Analysis Of Alternative Splicing Using Splicing Graphs


Bioinformatics Analysis Of Alternative Splicing Using Splicing Graphs
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Author : Durgaprasad Bollina
language : en
Publisher:
Release Date : 2008

Bioinformatics Analysis Of Alternative Splicing Using Splicing Graphs written by Durgaprasad Bollina and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with Bioinformatics categories.




Bioinformatics Analysis Of Alternative Splicing In Fungi


Bioinformatics Analysis Of Alternative Splicing In Fungi
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Author : Patricia Sieber
language : en
Publisher:
Release Date : 2019*

Bioinformatics Analysis Of Alternative Splicing In Fungi written by Patricia Sieber and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019* with categories.




Bioinformatics Analysis Of Alternative Splicing In Chlamydomonas Reinhardtii


Bioinformatics Analysis Of Alternative Splicing In Chlamydomonas Reinhardtii
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Author : Praveen Kumar Raj Kumar
language : en
Publisher:
Release Date : 2010

Bioinformatics Analysis Of Alternative Splicing In Chlamydomonas Reinhardtii written by Praveen Kumar Raj Kumar and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010 with Bioinformatics categories.


Pre-mRNA splicing is one of the fundamental post-transcriptional processes in eukaryotic gene expression and regulation. Alternative Splicing (AS) occurs when different splice sites of pre-mRNA are processed to generate mRNA isoforms leading to diverse proteins with functional and/or structural differences from the same gene. The first chapter of my thesis gives a mini review on alternative splicing in plants. The second chapter reports the finding on the bioinformatics analysis of alternative splicing in Chlamydomonas reinhardtii. Unlike in mammals, intron retention is the major mode of alternative splicing in plants, suggesting distinctive regulatory mechanisms of AS between plants and animals. Chlamydomonas reinhardtii, an alga that shares both animal and plant traits serves a good model to study evolutionary perspective of AS and its underlying mechanisms. In this alga, retained introns are significantly shorter and have weaker splice sites, with fewer G-triplets intronic splicing enhancers and C-triplets than constitutively spliced introns.



Alternative Pre Mrna Splicing


Alternative Pre Mrna Splicing
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Author : Stefan Stamm
language : en
Publisher: John Wiley & Sons
Release Date : 2012-02-13

Alternative Pre Mrna Splicing written by Stefan Stamm and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-02-13 with Science categories.


Der definitive Leitfaden zum RNA-Splicing - ideal für alle Kliniker, die sich mit genetischen Erkrankungen befassen, insbesondere natürlich für RNA-Forscher. Website: www.wiley-vch.de/home/splicing



A Bioinformatics Analysis Of Alternative Splicing In A Cellular Model Of Hodgkin Lymphoma


A Bioinformatics Analysis Of Alternative Splicing In A Cellular Model Of Hodgkin Lymphoma
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Author : Nikolai N. Genov
language : de
Publisher:
Release Date : 2022*

A Bioinformatics Analysis Of Alternative Splicing In A Cellular Model Of Hodgkin Lymphoma written by Nikolai N. Genov and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2022* with categories.




Alternative Splicing In The Postgenomic Era


Alternative Splicing In The Postgenomic Era
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Author : Benjamin J. Blencowe
language : en
Publisher: Springer Science & Business Media
Release Date : 2008-01-23

Alternative Splicing In The Postgenomic Era written by Benjamin J. Blencowe and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008-01-23 with Medical categories.


Yet again Springer has reached the market before everyone. This is the first book that is solely dedicated to the topic of alternative splicing. The book contains chapters by experts in the field that cover nearly all aspects of this hugely important subject. The purpose of the text is to provide a single, authoritative source of information on alternative splicing that is accessible to researchers in diverse fields. It is suitable for beginners and experts alike.



Bioinformatics In The Era Of Post Genomics And Big Data


Bioinformatics In The Era Of Post Genomics And Big Data
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Author : Ibrokhim Y. Abdurakhmonov
language : en
Publisher: BoD – Books on Demand
Release Date : 2018-06-20

Bioinformatics In The Era Of Post Genomics And Big Data written by Ibrokhim Y. Abdurakhmonov and has been published by BoD – Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-06-20 with Medical categories.


Bioinformatics has evolved significantly in the era of post genomics and big data. Huge advancements were made toward storing, handling, mining, comparing, extracting, clustering and analysis as well as visualization of big macromolecular data using novel computational approaches, machine and deep learning methods, and web-based server tools. There are extensively ongoing world-wide efforts to build the resources for regional hosting, organized and structured access and improving the pre-existing bioinformatics tools to efficiently and meaningfully analyze day-to-day increasing big data. This book intends to provide the reader with updates and progress on genomic data analysis, data modeling and network-based system tools.