Insights In Systems Biology Research
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Insights In Systems Biology Research
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Author : Gary An
language : en
Publisher: Frontiers Media SA
Release Date : 2025-06-10
Insights In Systems Biology Research written by Gary An and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-06-10 with Science categories.
Summary of Topic: This collection represents an interdisciplinary exploration of systems biology and systems medicine, integrating advanced methodologies from computational modeling, deep neural networks, and multiomics to improve understanding and treatment of human diseases and biological mechanisms. Emphasis is placed on cutting-edge technologies, including deep learning for statistical inference from gene expression data and noncoding genetic variants, quantitative systems pharmacology for virtual patient generation, and semi-mechanistic modeling applied to novel therapies such as CAR T-cell interventions. The articles further highlight disease modeling across various scales, exemplified through multi-scale simulation frameworks applied to complex conditions such as COVID-19 long-term sequelae, rheumatoid arthritis, epilepsy, and tuberculosis. Additionally, the importance of modularity in biological networks, developments in functional annotation of microbial transporters, and new approaches towards bioengineered bacterial consortia through molecular communication are discussed. This collection informs us of the ongoing efforts to harness computational power and biological insights to advance personalized medicine, improve therapeutic strategies, and deepen our understanding of complex biological phenomena. ----- Systems Biology has undergone significant transformations due to the pioneering efforts of researchers worldwide. The discipline now spans several subfields, such as Neuroscience, Genetics and Genomics, Medicine, among others, each advancing the field in unique ways through innovative technologies and insightful discoveries. This evolution is celebrated in a curated collection by Frontiers in Systems Biology, which aims to highlight the state-of-the-art developments and set the stage for future inquiries and applications in the field. This collection actively showcases the overlap of technology with theoretical advancements, creating a broad framework from which new methodologies and strategies are born. This Research Topic aims to provide an overview of the most recent progress in Systems Biology. It seeks to outline the impacts that the integration of disparate biological research areas can have in solving complex biological problems and advancing human health. Without losing sight of the past achievements, the goal is to explore the potential of future advancements, addressing the challenges that remain at the forefront of this vibrant field. The scope of this Research Topic is broadly defined yet focused on areas where significant innovative strides have been made. We welcome contributions that emphasize: - Integrative approaches in Systems Neuroscience - Contemporary breakthroughs in Genetics and Genomics - The use of Multiscale Mechanistic Modelling to represent biological interfaces - Bridging gaps between experimental and computational biology in Translational Systems Biology - Enhancing methodologies in Data and Model Integration This collection welcomes contributions from Editorial Board Members or those referred by a board member, reflecting on current developments and plotting pathways for upcoming research endeavors. Authors are encouraged to engage critically with their fields, identifying current challenges and proposing novel solutions to advance the understanding of complex systems within biology.
Handbook Of Systems Biology
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Author : Marian Walhout
language : en
Publisher: Academic Press
Release Date : 2012-12-31
Handbook Of Systems Biology written by Marian Walhout and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-12-31 with Science categories.
This book provides an entry point into Systems Biology for researchers in genetics, molecular biology, cell biology, microbiology and biomedical science to understand the key concepts to expanding their work. Chapters organized around broader themes of Organelles and Organisms, Systems Properties of Biological Processes, Cellular Networks, and Systems Biology and Disease discuss the development of concepts, the current applications, and the future prospects. Emphasis is placed on concepts and insights into the multi-disciplinary nature of the field as well as the importance of systems biology in human biological research. Technology, being an extremely important aspect of scientific progress overall, and in the creation of new fields in particular, is discussed in 'boxes' within each chapter to relate to appropriate topics. - 2013 Honorable Mention for Single Volume Reference in Science from the Association of American Publishers' PROSE Awards - Emphasizes the interdisciplinary nature of systems biology with contributions from leaders in a variety of disciplines - Includes the latest research developments in human and animal models to assist with translational research - Presents biological and computational aspects of the science side-by-side to facilitate collaboration between computational and biological researchers
Philosophy Of Systems Biology
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Author : Sara Green
language : en
Publisher: Springer
Release Date : 2016-12-15
Philosophy Of Systems Biology written by Sara Green and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-12-15 with Science categories.
The emergence of systems biology raises many fascinating questions: What does it mean to take a systems approach to problems in biology? To what extent is the use of mathematical and computational modelling changing the life sciences? How does the availability of big data influence research practices? What are the major challenges for biomedical research in the years to come? This book addresses such questions of relevance not only to philosophers and biologists but also to readers interested in the broader implications of systems biology for science and society. The book features reflections and original work by experts from across the disciplines including systems biologists, philosophers, and interdisciplinary scholars investigating the social and educational aspects of systems biology. In response to the same set of questions, the experts develop and defend their personal perspectives on the distinctive character of systems biology and the challenges that lie ahead. Readers are invited to engage with different views on the questions addressed, and may explore numerous themes relating to the philosophy of systems biology. This edited work will appeal to scholars and all levels, from undergraduates to researchers, and to those interested in a variety of scholarly approaches such as systems biology, mathematical and computational modelling, cell and molecular biology, genomics, systems theory, and of course, philosophy of biology.
Insights In Synthetic Biology 2021 Novel Developments Current Challenges And Future Perspectives
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Author : Jean Marie François
language : en
Publisher: Frontiers Media SA
Release Date : 2023-05-05
Insights In Synthetic Biology 2021 Novel Developments Current Challenges And Future Perspectives written by Jean Marie François and has been published by Frontiers Media SA this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-05-05 with Science categories.
Systems Biology Approaches Prevention Diagnosis And Understanding Mechanisms Of Complex Diseases
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Author : Sanket Joshi
language : en
Publisher: Springer Nature
Release Date : 2024-05-16
Systems Biology Approaches Prevention Diagnosis And Understanding Mechanisms Of Complex Diseases written by Sanket Joshi and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-05-16 with Science categories.
This book examines the development and applications of system biology approaches for the prevention, diagnosis, and understanding of disease mechanisms. It explores the applications of system biology in infectious diseases, including host-pathogen interaction, and the identification of targets for new therapeutics and intervention strategies. It covers the use of system biology for understanding and treating metabolic disorders towards personalized and precision medicine. The book further discusses the systems biology approaches for understanding the mechanisms of tumor progression and designing more effective cancer therapies. The chapter also reviews the current strategies in autoimmune disease treatment and highlights the opportunity that systems biology represents for the development of better and safer treatments. Importantly, the book discusses the current state of the systems-level understanding of diseases and both the therapeutic and adverse mechanisms of drug actions usingsystem biology approaches. Cutting across the disciplines, this book is a valuable source for researchers in genetics, molecular biology, cell biology, microbiology, and biomedical sciences.
Systems Biology And In Depth Applications For Unlocking Diseases
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Author : Babak Sokouti
language : en
Publisher: Elsevier
Release Date : 2024-11-05
Systems Biology And In Depth Applications For Unlocking Diseases written by Babak Sokouti and has been published by Elsevier this book supported file pdf, txt, epub, kindle and other format this book has been release on 2024-11-05 with Science categories.
Systems Biology and In-Depth Applications for Unlocking Diseases provides the essence of systems biology approaches in a practical manner illustrating the basic principles essential to develop and model in real life science applications. Methodologies covered show how to interrogate biological data, with the purpose of obtaining insight about disease diagnosis, prognosis, and treatment.Systematically written in 4 parts, this book first provides an introduction and history of systems biology; second, it provides the tools and resources needed for the structure and function of biological systems; next, it provides the evidence of systems biology in action to better understand disease connections; and finally, it provides the extensions of systems biology in various scientific fields including pharmacology, immunology, vaccinology, neuroscience, virology, and medicine. Examples include big data techniques, scale networks, mathematical model development, and much more.This is the perfect reference to provide the fundamental base of knowledge needed for systems biologists, professionals in systems medicine, computational biologists, and bioinformaticians, whether needed for immediate application or for building a comprehensive understanding of the field. - Provides detailed and comprehensive coverage of the field of systems biology - Delivers instruction on how to interrogate biological data, with the purpose of obtaining insight about disease diagnosis, prognosis, and treatment - Makes effective steps towards personalized medicine in the treatment of disease - Explains effective disease treatment strategies at early diagnosis stages
Omics Applications For Systems Biology
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Author : Wan Mohd Aizat
language : en
Publisher:
Release Date : 2018
Omics Applications For Systems Biology written by Wan Mohd Aizat and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018 with Systems biology categories.
"This book explains omics at the most basic level, including how this new concept can be properly utilized in molecular and systems biology research. Most reviews and books on this topic have mainly focused on the technicalities and complexity of each omics' platform, impeding readers to wholly understand its fundamentals and applications. This book tackles such gap and will be most beneficial to novice in this area, university students and even researchers. Basic workflow and practical guidance in each omics are also described, such that scientists can properly design their experimentation effectively. Furthermore, how each omics platform has been conducted in our institute (INBIOSIS) is also detailed, a comprehensive example on this topic to further enhance readers' understanding. The contributors of each chapter have utilized the platforms in various manner within their own research and beyond. The contributors have also been interactively integrated and combined these different omics approaches in their research, being able to systematically write each chapter with the conscious knowledge of other inter-relating topics of omics"--Publisher's description.
A Guide To Numerical Modelling In Systems Biology
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Author : Peter Deuflhard
language : en
Publisher: Springer
Release Date : 2015-07-06
A Guide To Numerical Modelling In Systems Biology written by Peter Deuflhard and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-07-06 with Mathematics categories.
This book is intended for students of computational systems biology with only a limited background in mathematics. Typical books on systems biology merely mention algorithmic approaches, but without offering a deeper understanding. On the other hand, mathematical books are typically unreadable for computational biologists. The authors of the present book have worked hard to fill this gap. The result is not a book on systems biology, but on computational methods in systems biology. This book originated from courses taught by the authors at Freie Universität Berlin. The guiding idea of the courses was to convey those mathematical insights that are indispensable for systems biology, teaching the necessary mathematical prerequisites by means of many illustrative examples and without any theorems. The three chapters cover the mathematical modelling of biochemical and physiological processes, numerical simulation of the dynamics of biological networks and identification of model parameters by means of comparisons with real data. Throughout the text, the strengths and weaknesses of numerical algorithms with respect to various systems biological issues are discussed. Web addresses for downloading the corresponding software are also included.
Systems Biology
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Author : Jens Nielsen
language : en
Publisher: John Wiley & Sons
Release Date : 2017-03-15
Systems Biology written by Jens Nielsen and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-03-15 with Computers categories.
Comprehensive coverage of the many different aspects of systems biology, resulting in an excellent overview of the experimental and computational approaches currently in use to study biological systems. Each chapter represents a valuable introduction to one specific branch of systems biology, while also including the current state of the art and pointers to future directions. Following different methods for the integrative analysis of omics data, the book goes on to describe techniques that allow for the direct quantification of carbon fluxes in large metabolic networks, including the use of 13C labelled substrates and genome-scale metabolic models. The latter is explained on the basis of the model organism Escherichia coli as well as the human metabolism. Subsequently, the authors deal with the application of such techniques to human health and cell factory engineering, with a focus on recent progress in building genome-scale models and regulatory networks. They highlight the importance of such information for specific biological processes, including the ageing of cells, the immune system and organogenesis. The book concludes with a summary of recent advances in genome editing, which have allowed for precise genetic modifications, even with the dynamic control of gene expression. This is part of the Advances Biotechnology series, covering all pertinent aspects of the field with each volume prepared by eminent scientists who are experts on the topic in question.