Models And Algorithms For Genome Evolution

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Models And Algorithms For Genome Evolution

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Author : Cedric Chauve
language : en
Publisher: Springer Science & Business Media
Release Date : 2013-09-17

Models And Algorithms For Genome Evolution written by Cedric Chauve and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-09-17 with Computers categories.

This authoritative text/reference presents a review of the history, current status, and potential future directions of computational biology in molecular evolution. Gathering together the unique insights of an international selection of prestigious researchers, this must-read volume examines the latest developments in the field, the challenges that remain, and the new avenues emerging from the growing influx of sequence data. These viewpoints build upon the pioneering work of David Sankoff, one of the founding fathers of computational biology, and mark the 50th anniversary of his first scientific article. The broad spectrum of rich contributions in this essential collection will appeal to all computer scientists, mathematicians and biologists involved in comparative genomics, phylogenetics and related areas.

Power Laws Scale Free Networks And Genome Biology

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Author : Eugene V. Koonin
language : en
Publisher: Springer
Release Date : 2011-02-11

Power Laws Scale Free Networks And Genome Biology written by Eugene V. Koonin and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-02-11 with Science categories.

Power Laws, Scale-free Networks and Genome Biology deals with crucial aspects of the theoretical foundations of systems biology, namely power law distributions and scale-free networks which have emerged as the hallmarks of biological organization in the post-genomic era. The chapters in the book not only describe the interesting mathematical properties of biological networks but moves beyond phenomenology, toward models of evolution capable of explaining the emergence of these features. The collection of chapters, contributed by both physicists and biologists, strives to address the problems in this field in a rigorous but not excessively mathematical manner and to represent different viewpoints, which is crucial in this emerging discipline. Each chapter includes, in addition to technical descriptions of properties of biological networks and evolutionary models, a more general and accessible introduction to the respective problems. Most chapters emphasize the potential of theoretical systems biology for discovery of new biological phenomena.

Algorithms In Bioinformatics

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Author : Teresa M. Przytycka
language : en
Publisher: Springer Science & Business Media
Release Date : 2011-08-30

Algorithms In Bioinformatics written by Teresa M. Przytycka and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-08-30 with Computers categories.

This book constitutes the refereed proceedings of the 11th International Workshop on Algorithms in Bioinformatics, WABI 2011, held in Saarbrücken, Germany, in September 2011. The 30 papers presented were carefully reviewed and selected from 77 submissions. They cover aspects of algorithms in bioinformatics, computational biology and systems biology.

Models And Algorithms For Whole Genome Evolution And Their Use In Phylogenetic Inference

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Author : Yu Lin
language : en
Publisher:
Release Date : 2012

Models And Algorithms For Whole Genome Evolution And Their Use In Phylogenetic Inference written by Yu Lin and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012 with categories.

Algorithms In Bioinformatics

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Author : Dan Brown
language : en
Publisher: Springer
Release Date : 2014-08-15

Algorithms In Bioinformatics written by Dan Brown and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-08-15 with Computers categories.

This book constitutes the refereed proceedings of the 14th International Workshop on Algorithms in Bioinformatics, WABI 2014, held in Wroclaw, Poland, in September 2014. WABI 2014 was one of seven conferences that were organized as part of ALGO 2014. WABI is an annual conference series on all aspects of algorithms and data structure in molecular biology, genomics and phylogeny data analysis. The 26 full papers presented together with a short abstract were carefully reviewed and selected from 61 submissions. The selected papers cover a wide range of topics from sequence and genome analysis through phylogeny reconstruction and networks to mass spectrometry data analysis.

Next Generation Sequencing

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Author : Jerzy Kulski
language : en
Publisher: BoD – Books on Demand
Release Date : 2016-01-14

Next Generation Sequencing written by Jerzy Kulski and has been published by BoD – Books on Demand this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-01-14 with Medical categories.

Next generation sequencing (NGS) has surpassed the traditional Sanger sequencing method to become the main choice for large-scale, genome-wide sequencing studies with ultra-high-throughput production and a huge reduction in costs. The NGS technologies have had enormous impact on the studies of structural and functional genomics in all the life sciences. In this book, Next Generation Sequencing Advances, Applications and Challenges, the sixteen chapters written by experts cover various aspects of NGS including genomics, transcriptomics and methylomics, the sequencing platforms, and the bioinformatics challenges in processing and analysing huge amounts of sequencing data. Following an overview of the evolution of NGS in the brave new world of omics, the book examines the advances and challenges of NGS applications in basic and applied research on microorganisms, agricultural plants and humans. This book is of value to all who are interested in DNA sequencing and bioinformatics across all fields of the life sciences.

The Topological Model Of Genome And Evolution

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Author : Pradeep Chhaya
language : en
Publisher: Springer Nature
Release Date : 2023-09-19

The Topological Model Of Genome And Evolution written by Pradeep Chhaya and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-09-19 with Science categories.

This book deals with the missing link in the domain of functional genomics viz. genomic architecture. It begins with a deconstruction of the Darwinian paradigm using the proposed model of modified involuted manifolds. It recasts the process of natural selection as a process of information transfer. Using a topological model, this book outlines a new genomic architecture. The key argument for this proposed model is that some such structuralism has always been implicit in genomics. The proposed model fits very well with the known genomic characteristics and allows to separate the regulatory genome from the transcriptive genomes. The model is capable of discerning modular architecture of genomes with different genomic functionalities existing in hierarchical relationships and demonstrates that genomes act as units of selection and as the environment for the individual genes which act as competing species. Towards the end, the book also examines the role of genomic evolution in cancer and the principles of natural selection and evolution of the genotype. The regulatory genome is also discussed, with an emphasis on its evolution and natural selection. It is a valuable source for researchers working in functional genomics, mathematical modeling in biology and evolutionary genomics.

Distributed Computing Artificial Intelligence Bioinformatics Soft Computing And Ambient Assisted Living

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Author : Sigeru Omatu
language : en
Publisher: Springer
Release Date : 2009-06-06

Distributed Computing Artificial Intelligence Bioinformatics Soft Computing And Ambient Assisted Living written by Sigeru Omatu and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-06-06 with Computers categories.

This volume (II) contains all publications accepted for the symposiums and workshops held in parallel with the 10th International Work-Conference on Artificial Neural Networks (IWANN 2009), covering a wide spectrum of technological areas such as distributed computing, artificial intelligence, bioinformatics, soft computing and ambient-assisted living: • DCAI 2009 (International Symposium on Distributed Computing and Artificial Intelligence), covering artificial intelligence and its applications in distributed environments, such as the Internet, electronic commerce, mobile communi- tions, wireless devices, distributed computing, and so on. This event accepted a total of 96 submissions selected from a submission pool of 157 papers, from 12 different countries. • IWAAL 2009 (International Workshop of Ambient-Assisted Living), covering solutions aimed at increasing the quality of life, safety and health problems of elderly and disabled people by means of technology. This event accepted a - tal of 42 submissions selected from a submission pool of 78 papers, from 9 d- ferent countries. • IWPACBB 2009 (Third International Workshop on Practical Applications of Computational Biology and Bioinformatics), covering computational biology and bioinformatics as a possibility for knowledge discovery, modelling and - timization tasks, aiming at the development of computational models so that the response of biological complex systems to any perturbation can be p- dicted. This event accepted a total of 39 submissions selected from a subm- sion pool of 75 papers, from 6 different countries.

Comparative Genomics

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Author : Eric Tannier
language : en
Publisher: Springer
Release Date : 2010-10-13

Comparative Genomics written by Eric Tannier and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-10-13 with Science categories.

The complexity of genome evolution has given birth to exciting challenges for computational biologists. A various range of algorithmic, statistical, mathem- ical techniques to elucidate the histories of molecules are developed each year and many are presented at the RECOMB satellite workshop on Comparative Genomics. It is a place where scientists working on all aspects of comparative genomics can share ideas on the development of tools and their application to relevant questions. This volume contains the papers presented at RECOMB-CG 2010, held on October 9–11 in Ottawa. The ?eld is still ?ourishing as seen from the papers presented this year: many developments enrich the combinatorics of genome rearrangements, while gene order phylogenies are becoming more and more - curate, thanks to a mixing of combinatorial and statistical principles, associated with rapid and thoughtful heuristics. Several papers tend to re?ne the models of genome evolution, and more and more genomic events can be modeled, from single nucleotide substitutions in whole genome alignments to large structural mutations or horizontal gene transfers.

Encyclopedia Of Evolutionary Biology

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Author :
language : en
Publisher: Academic Press
Release Date : 2016-04-14

Encyclopedia Of Evolutionary Biology written by and has been published by Academic Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-04-14 with Science categories.

Encyclopedia of Evolutionary Biology, Four Volume Set is the definitive go-to reference in the field of evolutionary biology. It provides a fully comprehensive review of the field in an easy to search structure. Under the collective leadership of fifteen distinguished section editors, it is comprised of articles written by leading experts in the field, providing a full review of the current status of each topic. The articles are up-to-date and fully illustrated with in-text references that allow readers to easily access primary literature. While all entries are authoritative and valuable to those with advanced understanding of evolutionary biology, they are also intended to be accessible to both advanced undergraduate and graduate students. Broad topics include the history of evolutionary biology, population genetics, quantitative genetics; speciation, life history evolution, evolution of sex and mating systems, evolutionary biogeography, evolutionary developmental biology, molecular and genome evolution, coevolution, phylogenetic methods, microbial evolution, diversification of plants and fungi, diversification of animals, and applied evolution. Presents fully comprehensive content, allowing easy access to fundamental information and links to primary research Contains concise articles by leading experts in the field that ensures current coverage of each topic Provides ancillary learning tools like tables, illustrations, and multimedia features to assist with the comprehension process