Computational Methods For Understanding Bacterial And Archaeal Genomes

DOWNLOAD
Download Computational Methods For Understanding Bacterial And Archaeal Genomes PDF/ePub or read online books in Mobi eBooks. Click Download or Read Online button to get Computational Methods For Understanding Bacterial And Archaeal Genomes book now. This website allows unlimited access to, at the time of writing, more than 1.5 million titles, including hundreds of thousands of titles in various foreign languages. If the content not found or just blank you must refresh this page
Computational Methods For Understanding Bacterial And Archaeal Genomes
DOWNLOAD
Author : Ying Xu
language : en
Publisher: Imperial College Press
Release Date : 2008
Computational Methods For Understanding Bacterial And Archaeal Genomes written by Ying Xu and has been published by Imperial College Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with Science categories.
Over 500 prokaryotic genomes have been sequenced to date, and thousands more have been planned for the next few years. While these genomic sequence data provide unprecedented opportunities for biologists to study the world of prokaryotes, they also raise extremely challenging issues such as how to decode the rich information encoded in these genomes. This comprehensive volume includes a collection of cohesively written chapters on prokaryotic genomes, their organization and evolution, the information they encode, and the computational approaches needed to derive such information. A comparative view of bacterial and archaeal genomes, and how information is encoded differently in them, is also presented. Combining theoretical discussions and computational techniques, the book serves as a valuable introductory textbook for graduate-level microbial genomics and informatics courses.
A First Course In Systems Biology
DOWNLOAD
Author : Eberhard Voit
language : en
Publisher: Garland Science
Release Date : 2017-09-05
A First Course In Systems Biology written by Eberhard Voit and has been published by Garland Science this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-09-05 with Computers categories.
A First Course in Systems Biology is an introduction for advanced undergraduate and graduate students to the growing field of systems biology. Its main focus is the development of computational models and their applications to diverse biological systems. The book begins with the fundamentals of modeling, then reviews features of the molecular inventories that bring biological systems to life and discusses case studies that represent some of the frontiers in systems biology and synthetic biology. In this way, it provides the reader with a comprehensive background and access to methods for executing standard systems biology tasks, understanding the modern literature, and launching into specialized courses or projects that address biological questions using theoretical and computational means. New topics in this edition include: default modules for model design, limit cycles and chaos, parameter estimation in Excel, model representations of gene regulation through transcription factors, derivation of the Michaelis-Menten rate law from the original conceptual model, different types of inhibition, hysteresis, a model of differentiation, system adaptation to persistent signals, nonlinear nullclines, PBPK models, and elementary modes. The format is a combination of instructional text and references to primary literature, complemented by sets of small-scale exercises that enable hands-on experience, and large-scale, often open-ended questions for further reflection.
A First Course In Systems Biology
DOWNLOAD
Author : Eberhard O. Voit
language : en
Publisher: Garland Science
Release Date : 2012-03-28
A First Course In Systems Biology written by Eberhard O. Voit and has been published by Garland Science this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-03-28 with Computers categories.
A First Course in Systems Biology is a textbook designed for advanced undergraduate and graduate students. Its main focus is the development of computational models and their applications to diverse biological systems. Because the biological sciences have become so complex that no individual can acquire complete knowledge in any given area of specialization, the education of future systems biologists must instead develop a student's ability to retrieve, reformat, merge, and interpret complex biological information. This book provides the reader with the background and mastery of methods to execute standard systems biology tasks, understand the modern literature, and launch into specialized courses or projects that address biological questions using theoretical and computational means. The format is a combination of instructional text and references to primary literature, complemented by sets of small-scale exercises that enable hands-on experience, and larger-scale, often open-ended questions for further reflection.
Regulatory Genomics
DOWNLOAD
Author : Hon Wai Leong
language : en
Publisher: Imperial College Press
Release Date : 2008
Regulatory Genomics written by Hon Wai Leong and has been published by Imperial College Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008 with Science categories.
Research in the field of gene regulation is evolving rapidly in the ever-changing scientific environment. Advances in microarray techniques and comparative genomics have enabled more comprehensive studies of regulatory genomics. The study of genomic binding locations of transcription factors has enabled a more comprehensive modeling of regulatory networks. In addition, complete genomic sequences and comparison of numerous related species have demonstrated the conservation of non-coding DNA sequences, which often provide evidence for cis-regulatory binding sites. Systematic methods to decipher the regulatory mechanism are also crucial for corroborating these regulatory networks; key to these methods are motif discovery algorithms that can help predict cis-regulatory elements. These DNA-motif discovery programs are becoming more sophisticated and are beginning to leverage evidence from comparative genomics. These topics and more were discussed at the 3rd Annual RECOMB Workshop on Regulatory Genomics, which brought together more than 90 attendees and included about 22 excellent talks from leading researchers in the field. This proceedings volume contains ten selected, original manuscripts that were presented during the workshop.
Essential Computing Skills For Biologists
DOWNLOAD
Author : Ziling Wang
language : en
Publisher: World Scientific
Release Date : 2018-07-02
Essential Computing Skills For Biologists written by Ziling Wang and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-07-02 with Science categories.
This is a handbook of methods and protocols for biologists. It aimed at undergraduate, graduate students and researchers originally trained in biological or medical sciences who need to know how to access the data archives of genomes, proteins, metabolites, gene expression profiles and the questions these data and tools can answer. For each chapter, the conceptual and experimental background is provided, together with specific guidelines for handling raw data, including preprocessing and analysis.The content is structured into three parts. Part one introduces basic knowledge about popular bioinformatics tools, databases and web resources. Part two presents examples of omics bioinformatics applications. Part three provides basic statistical analysis skills and programming skills needed to handle and analyze omics datasets.
Applications Of Fuzzy Logic In Bioinformatics
DOWNLOAD
Author : Dong Xu
language : en
Publisher: World Scientific
Release Date : 2008-08-11
Applications Of Fuzzy Logic In Bioinformatics written by Dong Xu and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008-08-11 with Science categories.
Many biological systems and objects are intrinsically fuzzy as their properties and behaviors contain randomness or uncertainty. In addition, it has been shown that exact or optimal methods have significant limitation in many bioinformatics problems. Fuzzy set theory and fuzzy logic are ideal to describe some biological systems/objects and provide good tools for some bioinformatics problems. This book comprehensively addresses several important bioinformatics topics using fuzzy concepts and approaches, including measurement of ontological similarity, protein structure prediction/analysis, and microarray data analysis. It also reviews other bioinformatics applications using fuzzy techniques./a
Intelligent Transportation Systems
DOWNLOAD
Author : Syed Faraz Hasan
language : en
Publisher: Springer
Release Date : 2017-09-09
Intelligent Transportation Systems written by Syed Faraz Hasan and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2017-09-09 with Technology & Engineering categories.
This new edition continues to focus on the nuts and bolts of wireless network access for devices on board vehicles. It has been updated to reflect on the most recent trends in the broad domain of Intelligent Transport Systems. It covers 802.11ac – a recent standard that is very useful in context where a large amount of information is to be sent in a limited time window. The new edition includes a thorough revision of the 'Vehicular Communication: Issues and Standards' chapter, with new citations and a new subsection on security. The new edition also cites numerous fresh research works to give readers an updated overview of the field. An update on the time delay incurred by applications that always run in the background (Skype, etc) is also covered. The 'Future Directions and Research Ideas' chapter is also largely re-written. An entirely new chapter on D2D communication keeping in view the vehicular context has been added in this edition. This volume will be a useful addition to the libraries for both the students of wireless communication and those studying applied probability.
Intelligent Transport Systems
DOWNLOAD
Author : Syed Faraz Hasan
language : en
Publisher: Springer Science & Business Media
Release Date : 2012-07-25
Intelligent Transport Systems written by Syed Faraz Hasan and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2012-07-25 with Technology & Engineering categories.
Focusing on the nuts and bolts of wireless network access for computers on board vehicles, this volume shows how in-car computerization now does much more than merely act as a glorified map-reader. Wireless communication is transforming road travel in ways previously undreamt of, allowing vehicles to “talk” to a wider network and monitor road conditions, potential delays and traffic congestion, all automatically. Toll payments can be made without opening the driver’s window on a cold day, while vehicles might themselves take active steps to avoid collisions. It is the connection between on-board computers and wireless access points, ubiquitous in most cities now, that is a key area of research. Moving vehicles transfer their communications to new points as they progress, and this causes delays, known as “handover latency”. In this book, new stochastic models are developed to map the disruption when connecting to 802.11 WLAN points. It details the application of stochastic tools to analyzing communication networks, as well as previous literature on handover latency and relevant mathematical modeling. Finally, it presents a scheme for monitoring traffic congestion using WLAN connectivity. This volume will be a useful addition to the libraries both of wireless communication students and those studying probability theory.
Brainstem Neural Networks Vital For Life
DOWNLOAD
Author : Cecilia M. Heyes
language : en
Publisher:
Release Date : 2009
Brainstem Neural Networks Vital For Life written by Cecilia M. Heyes and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with Brain stem categories.
Microbial Genomic Islands In Adaptation And Pathogenicity
DOWNLOAD
Author : Indra Mani
language : en
Publisher: Springer Nature
Release Date : 2023-03-31
Microbial Genomic Islands In Adaptation And Pathogenicity written by Indra Mani and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2023-03-31 with Science categories.
This book elucidates the role of microbial genomic islands (GEIs) in genome stability, plasticity, evolutionary adaptation, and pathogenicity in the bacterial population. The initial chapters of the book present tools, including bioinformatics, artificial intelligence, machine learning, next-generation sequencing, and molecular biology techniques, for the analysis of the genomic islands. The book also discusses the importance of genomic islands in bacterial speciation, acquisition of genes related to resistome, nitrogen fixation, mobilomes, and nutritional fitness and adaptation. It provides recent advances in understanding microbial genomic islands' distribution, evolution, and mechanistic modes of behavior in pathogenic, non-pathogenic, and environmental species. This book is a valuable source for beginners in molecular microbiology, students, researchers, clinicians, stakeholders, and policymakers interested in understanding the role of GEIs in the adaptive evolution of microorganisms.